Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00023 ATGGCGACAAAGGAAGGCAAAGCCATAGGCATAGACCTTGGCACCACATACAGCTGCGTCGGCGTGTGGCAAAACGACCGCGTTGAGATCATTCCAAATGACCAAGGCAACAGAACCACCCCCTCCTACGTTGCCTTCACCGACACAGAGAGGCTGATCGGCGATGCGGCGAAGAATCAAGTGGCCATGAATCCACAGAACACCGTTTTCGACGCCAAGCGTTTGATCGGTAGGAAACTCTCCGACCCATCGGTTCAGAACGACATGAAGTTATGGCCGTTTAAGGTTGTAGCAGGCCCTGGCGACAAACCAATGATCGTGGTGAATTACAAGGGCGAGGAGAAAAAATTCTCAGCTGAAGAGATATCTTCGATGGTGTTGACGAAGATGAGGGAGGTAGCAGAAGCGTTTCTGGGTCATCCAGTGAAGAACGCTGTGATCACTGTCCCTGCTTATTTCAACGATTCTCAGAGGCAAGCCACTAAGGATGCAGGGGCTATTTCTGGTATGAACGTGTTGAGAATCATTAACGAACCCACTGCTGCTGCTATTGCTTATGGTTTGGACAAGAAGGCTTCGAGAAAAGGTGAGCAGAACGTGCTTATTTTCGATTTGGGTGGTGGCACTTTTGATGTTTCTATTTTGACCATTGAGGAAGGGATTTTTGAGGTGAAGGCCACTGCTGGTGATACTCATCTTGGTGGTGAAGATTTTGATAATAGGATGGTGAATCATTTTGTGTCCGAGTTCAGGAGGAAGAACAAGAAGGATATTAGTGGGAATGCTAGAGCTCTGAGAAGGTTGAGGACAGCGTGTGAGAGGGCTAAGAGGACTTTGTCTTCCACTGCTCAAACAACCATTGAAATCGATTCCTTATATGAAGGGATTGATTTCTATGCTACAATCACCAGGGCTAGGTTTGAGGAACTGAACATGGATTTGTTCAGGAAGTGCATGGAGCCTGTGGAGAAGTGTCTGCGTGATGCAAAGATTGATAAGAGTCAGGTTCATGAGGTTGTTCTTGTTGGAGGGTCAACTAGAATTCCAAAGGTTCAGCAACTCTTGCAGGATTTCTTCAACGGGAAAGAGCTCTGCAAGAGTATTAACCCTGATGAAGCTGTTGCATATGGTGCAGCTGTTCAAGCTGCGATCTTGAGCGGTGAAGGAGACGAGAAGGTTCAGGATCTGTTGTTGCTTGATGTCACGCCGCTTAGTCTTGGACTCGAAACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCCAACGAAGAAGGAGCAGATTTTCTCCACATATTCTGATAATCAACCAGGTGTTTTGATCCAAGTGTATGAGGGAGAACGAGCTCGAACAAAGGATAACAACCTTCTCGGCAAGTTTGAGCTGAGTGGCATCCCTCCAGCCCCGAGAGGAGTGCCTCAAATCAATGAGGTGAAGAAGAAAGTGGAAGCCAAGAACTCACTTGAGAATTACGCGTACAACATGAGGAACACGATTAAGGATGAGAAGATTGGTGGGAAGTTGAGCCCTGACGAGAAGGAGAAGATTGAGAAGGCAGTTGAAGATGCCATACAGTGGTTGGAAGGAAACCAATTGGCTGAAGTGGAAGAGTTTGAGGACAAGCAGAAGGAGTTGGAAGGTATATGCAATCCCGTCATTGCCAAGATGTATCAGGGTGGTGGTGCTGGTGGAGGAGATGTGCCAATGGGTGATGACATGCCTGGTGGTGGGTCTGCTGGGTCGGGTTCTGGACCTGGACCCAAGATCGAAGAAGTTGATTGA 1794 0.4766 MATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKLSDPSVQNDMKLWPFKVVAGPGDKPMIVVNYKGEEKKFSAEEISSMVLTKMREVAEAFLGHPVKNAVITVPAYFNDSQRQATKDAGAISGMNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFRRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKEKIEKAVEDAIQWLEGNQLAEVEEFEDKQKELEGICNPVIAKMYQGGGAGGGDVPMGDDMPGGGSAGSGSGPGPKIEEVD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00023 597 Pfam Hsp70 protein 481 562 IPR013126 GO:0005524|GO:0140662
Gabi4651g00023 597 Pfam Hsp70 protein 8 480 IPR013126 GO:0005524|GO:0140662
Gabi4651g00023 597 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gabi4651g00023 597 Gene3D - 9 382 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 145 165 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 208 218 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 368 388 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 7 20 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 336 352 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 57 65 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 35 47 - -
Gabi4651g00023 597 PRINTS 70kDa heat shock protein signature 395 414 - -
Gabi4651g00023 597 Gene3D Actin; Chain A, domain 4 234 317 - -
Gabi4651g00023 597 FunFam Heat shock 70 kDa protein 388 542 - -
Gabi4651g00023 597 Gene3D - 484 597 IPR029048 -
Gabi4651g00023 597 SUPERFAMILY Actin-like ATPase domain 195 387 IPR043129 -
Gabi4651g00023 597 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 533 IPR029047 -
Gabi4651g00023 597 FunFam Heat shock 70 kDa protein 70 125 - -
Gabi4651g00023 597 Gene3D - 191 365 - -
Gabi4651g00023 597 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 383 480 IPR029047 -
Gabi4651g00023 597 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gabi4651g00023 597 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Gabi4651g00023 597 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Gabi4651g00023 597 FunFam Heat shock cognate 70 kDa protein 2 318 365 - -
Gabi4651g00023 597 FunFam Heat shock protein 70 9 195 - -
Gabi4651g00023 597 Gene3D - 70 125 - -
Gabi4651g00023 597 MobiDBLite consensus disorder prediction 563 597 - -
Gabi4651g00023 597 FunFam heat shock cognate 70 kDa protein-like 489 563 - -
Gabi4651g00023 597 FunFam Heat shock 70 kDa protein 196 259 - -
Gabi4651g00023 597 FunFam Heat shock 70 kDa 234 317 - -
Gabi4651g00023 597 CDD HSPA1-2_6-8-like_NBD 8 386 - -
Gabi4651g00023 597 PANTHER HEAT SHOCK PROTEIN 70KDA 8 527 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00023 Gabi-Chr4651 249419 251679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00023 1 597 Calmodulin-binding Proteins AT1G16030 77.761 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00023 K03283 - gmx:100790356 949.503