Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00022 ATGCAGCAAGGTGATCAAACGGTGTTGAGTTTGAGGCCTGGTGGCGGTCGAGGCGGCAGGCTTCTTGGTCCTCGATTCGATTCATCTTCATCAACGACTTCTGCTTCTCCTGCGTTTGGCTCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCCCATGGCGCCACTTCTTCATTCTCTATTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATATACCAGAGATCAGCTTCTACAGCTTAGAGAGGCCATTGAGGTCCTTGATGATGTTTTGAAGATCAAAGAAGATATTGAAGCTGAACTTTTAGGTGAAGATCAAAGTTGGGGCCGCACAGAAAACAACCCCCCAAATCAAATTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGTAGATCTGGACCACTTCCTGCTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGGCAATTCTAGTCAGGTTAATCGTCAAGACCAACTGAATTCTCAGTTTGCAAGGGCACAAAACCAAGGGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTTAAAGGAATACTGAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATTGACGCTGGCATTACATCAGCTGACATATTGAAGGGAGTCATTTCGCTGATTTTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCCATGTATGCTCTGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCGTCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAACGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAAGTAAGGCAGATGACTGCCCCTGAGCAGGAGATGGAACGGCGGGACAAGGAAAGACTTTTCAAGCTTCGTACCCTTGGAAACATCCGTTTAATCGGTGAGCTGCTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTGCAGGAGCTTTTAGGACCTCCGGACAGCAAGGTTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTCATCACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGGATGAATGACGTGTACTTTAGCCGGTTGAAAGAATTGAGCACAAATCCCCAACTTGCACTACGGCTGAGGTTTATGGTTCGGGATGTTTTAGATTTGCGTGCTTGTAACTGGATTCCAAGACGCGAAGAGGTGAGAGCCAAAACCATAACTGAAATTCATTCAGAGGCAGAGAAAAATCTTGGATTGCGTCCCGGTGCCACTGCAAGTATGAGAAATACCCGTGGTGTAATTTCTGGTGTTCAAGGAAATACCAGCACTGGGGGCTTCCCCATTGCCCGACCTGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCAGGAATTGATAGTGACAACTGGGAGATTCCTAGGAATAGGTCAATGCCAAGAGGAGACATATCAGGCATGCAAACTGGAGGACGTGGCCAATCTCCTTTGATTTCCAAGTCATCAGCCCTGAACTCAAAGTTACTACCCCAAGGTAGTGGTGGTCTTATAAGTGGTAGAAGTAGTGCCCTAGTGCATGGAGGTGGTGGTGCTTCTTCTTCTGCTCTTCCAGCAGCAAACATTGGGTTAGGTACTGAACCTGCACCTCAAATCCCTCCGCCTGTTAAAGCTTTATCTGCTGAATCCTTGGAGAAGCCACAGGCTCCAGCTGCTGAGAAGCCACAGGCTCCAGCTGCAAAATTGAATACTGCCGATCTTCACCGCAAAACTGTTTCTCTTCTGGAAGAATATTTCGGTGTTGGGCTTTTGGATGAGGCATTATGCTGTGTGGAGGAATTAAAATCTCCAGCTTATCACCCTGAGGTTGTCAAGGAAGCCATTTCCCTTGCACTAGATAAAAGTCCGCCATGTGTCCAACCTGTTGCCAATCTTCTGGAGTATCTGTTTAATAAGAAGATTCTTTCAGCTAGAGACATTGGGACTGGATGTTTGTTATTTGGTTCTATGCTGGATGATATTGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAATTTTGGCTGGGGTTTTGGATTTTAAGGTGGTGGCAGAGATCCTCAAGAAGGTGGACGATGACCGGTTCCAGAAAGCAATATTTGACTCTGCACTGCAGGTAATTAGCTCTGCAGCATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCGGAGTCTATTCTAG 2400 0.4629 MQQGDQTVLSLRPGGGRGGRLLGPRFDSSSSTTSASPAFGSFSADLPLLRPHGATSSFSIKAGDSRFEGRERVRYTRDQLLQLREAIEVLDDVLKIKEDIEAELLGEDQSWGRTENNPPNQIQNRYSEPDNRDWRGRSGPLPANADERSWDNLKENREFGNSSQVNRQDQLNSQFARAQNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEMERRDKERLFKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFITIGKQLDESPKSRRMNDVYFSRLKELSTNPQLALRLRFMVRDVLDLRACNWIPRREEVRAKTITEIHSEAEKNLGLRPGATASMRNTRGVISGVQGNTSTGGFPIARPGTGGLMPGMPGTRKMPGMPGIDSDNWEIPRNRSMPRGDISGMQTGGRGQSPLISKSSALNSKLLPQGSGGLISGRSSALVHGGGGASSSALPAANIGLGTEPAPQIPPPVKALSAESLEKPQAPAAEKPQAPAAKLNTADLHRKTVSLLEEYFGVGLLDEALCCVEELKSPAYHPEVVKEAISLALDKSPPCVQPVANLLEYLFNKKILSARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIVGKLILAGVLDFKVVAEILKKVDDDRFQKAIFDSALQVISSAASGQAVLDSQASDIEACRSLF 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00022 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 628 790 - -
Gabi4651g00022 799 MobiDBLite consensus disorder prediction 110 127 - -
Gabi4651g00022 799 MobiDBLite consensus disorder prediction 608 627 - -
Gabi4651g00022 799 MobiDBLite consensus disorder prediction 109 150 - -
Gabi4651g00022 799 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
Gabi4651g00022 799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 55 785 IPR045208 GO:0003743
Gabi4651g00022 799 MobiDBLite consensus disorder prediction 520 547 - -
Gabi4651g00022 799 Pfam MA3 domain 636 747 IPR003891 -
Gabi4651g00022 799 SUPERFAMILY ARM repeat 630 788 IPR016024 -
Gabi4651g00022 799 SUPERFAMILY ARM repeat 204 438 IPR016024 -
Gabi4651g00022 799 Coils Coil 83 103 - -
Gabi4651g00022 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 437 - -
Gabi4651g00022 799 MobiDBLite consensus disorder prediction 1 36 - -
Gabi4651g00022 799 Gene3D - 628 793 - -
Gabi4651g00022 799 ProSiteProfiles MI domain profile. 634 756 IPR003891 -
Gabi4651g00022 799 Gene3D - 201 437 - -
Gabi4651g00022 799 Pfam MIF4G domain 210 435 IPR003890 GO:0003723|GO:0005515
Gabi4651g00022 799 SMART ma3_7 635 747 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00022 Gabi-Chr4651 234301 240429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00022 1 798 Eukaryotic Initiation Factors Gene Family AT5G57870 64.242 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00022 K03260 - gmx:100781275 1294.26