Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00021 ATGCAGCAAGGTGATCAAACGGTGTTGAGTTTGAGGCCTGGTGGCGGTCGAGGCGGCAGGCTTCTTGGTCCTCGATTCGATTCATCTTCATCAACGACTTCTGCTTCTCCTGCGTTTGGCTCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCCCATGGCGCCACTTCTTCATTCTCTATTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATATACCAGAGATCAGCTTCTACAGCTTAGAGAGGCCATTGAGGTCCTTGATGATGTTTTGAAGATCAAAGAAGATATTGAAGCTGAACTTTTAGGTGAAGATCAAAGTTGGGGCCGCACAGAAAACAACGTGAGTCCCCCAAATCAAATTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGTAGATCTGGACCACTTCCTGCTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGGCAATTCTAGTCAGGTTAATCGTCAAGACCAACTGAATTCTCAGTTTGCAAGGGCACAAAACCAAGGGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTTAAAGGAATACTGAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATTGACGCTGGCATTACATCAGCTGACATATTGAAGGGAGTCATTTCGCTGATTTTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCCATGTATGCTCTGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCGTCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAACGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAAGTAAGGCAGATGACTGCCCCTGAGCAGGAGATGGAACGGCGGGACAAGGAAAGACTTTTCAAGCTTCGTACCCTTGGAAACATCCGTTTAATCGGTGAGCTGCTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTGCAGGAGCTTTTAGGACCTCCGGACAGCAAGGTTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTCATCACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGGATGAATGACGTGTACTTTAGCCGGTTGAAAGAATTGAGCACAAATCCCCAACTTGCACTACGGCTGAGGTTTATGGTTCGGGATGTTTTAGATTTGCGTGCTTGTAACTGGATTCCAAGACGCGAAGAGGTGAGAGCCAAAACCATAACTGAAATTCATTCAGAGGCAGAGAAAAATCTTGGATTGCGTCCCGGTGCCACTGCAAGTATGAGAAATACCCGTGGTGTAATTTCTGGTGTTCAAGGAAATACCAGCACTGGGGGCTTCCCCATTGCCCGACCTGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCAGGAATTGATAGTGACAACTGGGAGATTCCTAGGAATAGGTCAATGCCAAGAGGAGACATATCAGGCATGCAAACTGGAGGACGTGGCCAATCTCCTTTGATTTCCAAGTCATCAGCCCTGAACTCAAAGTTACTACCCCAAGGTAGTGGTGGTCTTATAAGTGGTAGAAGTAGTGCCCTAGTGCATGGAGGTGGTGGTGCTTCTTCTTCTGCTCTTCCAGCAGCAAACATTGGGTTAGGTACTGAACCTGCACCTCAAATCCCTCCGCCTGTTAAAGCTTTATCTGCTGAATCCTTGGAGAAGCCACAGGCTCCAGCTGCTGAGAAGCCACAGGCTCCAGCTGCAAAATTGAATACTGCCGATCTTCACCGCAAAACTGTTTCTCTTCTGGAAGAATATTTCGGTGTTGGGCTTTTGGATGAGGCATTATGCTGTGTGGAGGAATTAAAATCTCCAGCTTATCACCCTGAGGTTGTCAAGGAAGCCATTTCCCTTGCACTAGATAAAAGTCCGCCATGTGTCCAACCTGTTGCCAATCTTCTGGAGTATCTGTTTAATAAGAAGATTCTTTCAGCTAGAGACATTGGGACTGGATGTTTGTTATTTGGTTCTATGCTGGATGATATTGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAATTTTGGCTGGGGTTTTGGATTTTAAGGTGGTGGCAGAGATCCTCAAGAAGGTGGACGATGACCGGTTCCAGAAAGCAATATTTGACTCTGCACTGCAGGTAATTAGCTCTGCAGCATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCGGAGTCTATTCTAG 2406 0.463 MQQGDQTVLSLRPGGGRGGRLLGPRFDSSSSTTSASPAFGSFSADLPLLRPHGATSSFSIKAGDSRFEGRERVRYTRDQLLQLREAIEVLDDVLKIKEDIEAELLGEDQSWGRTENNVSPPNQIQNRYSEPDNRDWRGRSGPLPANADERSWDNLKENREFGNSSQVNRQDQLNSQFARAQNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEMERRDKERLFKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFITIGKQLDESPKSRRMNDVYFSRLKELSTNPQLALRLRFMVRDVLDLRACNWIPRREEVRAKTITEIHSEAEKNLGLRPGATASMRNTRGVISGVQGNTSTGGFPIARPGTGGLMPGMPGTRKMPGMPGIDSDNWEIPRNRSMPRGDISGMQTGGRGQSPLISKSSALNSKLLPQGSGGLISGRSSALVHGGGGASSSALPAANIGLGTEPAPQIPPPVKALSAESLEKPQAPAAEKPQAPAAKLNTADLHRKTVSLLEEYFGVGLLDEALCCVEELKSPAYHPEVVKEAISLALDKSPPCVQPVANLLEYLFNKKILSARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIVGKLILAGVLDFKVVAEILKKVDDDRFQKAIFDSALQVISSAASGQAVLDSQASDIEACRSLF 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00021 801 FunFam Eukaryotic translation initiation factor isoform 4G-2 630 792 - -
Gabi4651g00021 801 SMART ma3_7 637 749 IPR003891 -
Gabi4651g00021 801 Pfam MA3 domain 638 749 IPR003891 -
Gabi4651g00021 801 SUPERFAMILY ARM repeat 206 440 IPR016024 -
Gabi4651g00021 801 SUPERFAMILY ARM repeat 632 790 IPR016024 -
Gabi4651g00021 801 SMART if4_15 212 438 IPR003890 GO:0003723|GO:0005515
Gabi4651g00021 801 FunFam Eukaryotic translation initiation factor isoform 4G-2 203 439 - -
Gabi4651g00021 801 Coils Coil 83 103 - -
Gabi4651g00021 801 Pfam MIF4G domain 212 437 IPR003890 GO:0003723|GO:0005515
Gabi4651g00021 801 MobiDBLite consensus disorder prediction 1 36 - -
Gabi4651g00021 801 MobiDBLite consensus disorder prediction 610 629 - -
Gabi4651g00021 801 MobiDBLite consensus disorder prediction 111 152 - -
Gabi4651g00021 801 Gene3D - 203 439 - -
Gabi4651g00021 801 ProSiteProfiles MI domain profile. 636 758 IPR003891 -
Gabi4651g00021 801 Gene3D - 630 795 - -
Gabi4651g00021 801 MobiDBLite consensus disorder prediction 522 549 - -
Gabi4651g00021 801 MobiDBLite consensus disorder prediction 111 129 - -
Gabi4651g00021 801 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 55 787 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00021 Gabi-Chr4651 234301 240430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00021 1 800 Eukaryotic Initiation Factors Gene Family AT5G57870 64.207 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00021 K03260 - gmx:100781275 1289.25