Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00007 ATGGCTGAGCACCTCAGCTCCGAAGCTCTTCCCGGGGGAGCGCCGGAGCTTCACCGGAAGGGAGAGGATTCAGAACGAAACGGAGAAGAAGTAGAAGAAAAAGCCGGAGAGATAAAGGAGCGAGTCGGTGAATCGCCGCCGGCCACCGAGTCGCAGTGCGGCGAGTTACAGAGTTCTAATGAACCTACTACAGAGTCCAATTTAGAAACCCTAGCTTCTGCCGTTCCCTCTTCGGTTGAATCCCTTGTTGTGCAGCATCGGATTGCCGATTTGCAGGAGAGTTCTACCATGCTGAATTCGTGCGGCAAAGCCGAAAGTAAGACAGTTGGACCTCCTGAAAAGGAAACTATAGCAAGAGAAGCAGTCCAGGAACCCCCAACTCCAATAGAAAATCAGCGTCAGGTGTCTATGTGTTCAACTCCACTGTCTGAACTATCACCAACTTCTGTCACACAATCTTTATCATCTGTTCCTAGTCCAACTGCACCAAAACAGAAAATGTCTCCTCCGAAGGTTAATGACATGCATGTGCCGGAAGTAGTAAAAAATGTTCCTTCTGGTGGTAAAACCTTATCTGCTGTTTCTGTTCCAAGGTCATCAGCATCTGATGGATACAACTGGCGAAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTAGTGCTAAGAAAATTGAATGCTGTGATCATTCAGGTCATATGACAGAGATTGTTTATAAAAGTGAACACAGTCATGATCCCCCCAAGAGGACTCATTCCATAAGGGAAAGTAAGTTTGTGTCTTCCAATGAACCTACTGTAGAAAACAGTGTTCCAGAGAAGCCTATCAGAGCTCTGCCTATCAGAGTTCTGCAGGATTCTGATCCATCCATTTCTTCCAAAGAACCTCTACAAGAAGCACCTTGCTGTGCTGATAAGAAACGACAAAACTCATCTAATATCAGTGACGATAGTAAAGTTATTTTGAAGGAAGAACCTGTAAATGAGCCAGAGCCAAAACGAAGAATGAAGAAAGGTGACTTAACGGACTTGGATTCTGCCGTAAAACCTGGAAAGAAAGCCAAGTTTGTTGTACATGCAGCAGGCGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCCAGAAATTACTATAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCATATTGAGTCTGCTATAGATAACTCAAATGCTGTCATCATAACGTACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAAAGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTACCTCCATGAACAATTTGCAGTTAAAGAAACCTGACTCACCGCAAAACCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACTGGGGAAGCCTTGGACCTTGGGGGTGAGAAAGCAATGGAGTCCGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1557 0.4586 MAEHLSSEALPGGAPELHRKGEDSERNGEEVEEKAGEIKERVGESPPATESQCGELQSSNEPTTESNLETLASAVPSSVESLVVQHRIADLQESSTMLNSCGKAESKTVGPPEKETIAREAVQEPPTPIENQRQVSMCSTPLSELSPTSVTQSLSSVPSPTAPKQKMSPPKVNDMHVPEVVKNVPSGGKTLSAVSVPRSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCSAKKIECCDHSGHMTEIVYKSEHSHDPPKRTHSIRESKFVSSNEPTVENSVPEKPIRALPIRVLQDSDPSISSKEPLQEAPCCADKKRQNSSNISDDSKVILKEEPVNEPEPKRRMKKGDLTDLDSAVKPGKKAKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAIDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPTSMNNLQLKKPDSPQNQKISTQWSVDTEGELTGEALDLGGEKAMESARTLLSIGFEIKPC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00007 518 SUPERFAMILY WRKY DNA-binding domain 199 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 Pfam WRKY DNA -binding domain 381 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 Pfam WRKY DNA -binding domain 203 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 142 475 IPR044810 GO:0003700
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 299 330 - -
Gabi4651g00007 518 SMART WRKY_cls 201 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 SMART WRKY_cls 379 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 Gene3D WRKY domain 364 440 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 Gene3D WRKY domain 189 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 127 162 - -
Gabi4651g00007 518 SUPERFAMILY WRKY DNA-binding domain 375 439 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 253 269 - -
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 15 44 - -
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 50 68 - -
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 1 68 - -
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 98 205 - -
Gabi4651g00007 518 ProSiteProfiles WRKY domain profile. 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 ProSiteProfiles WRKY domain profile. 374 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 188 205 - -
Gabi4651g00007 518 FunFam WRKY transcription factor 365 440 - -
Gabi4651g00007 518 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00007 Gabi-Chr4651 82141 91885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00007 114 518 WRKY Transcription Factor Family AT4G30935 53.810 1.63e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4651g00007 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00007 - - gmx:100127377 757.288