Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00006 ATGGCTGAGCACCTCAGCTCCGAAGCTCTTCCCGGGGGAGCGCCGGAGCTTCACCGGAAGGGAGAGGATTCAGAACGAAACGGAGAAGAAGTAGAAGAAAAAGCCGGAGAGATAAAGGAGCGAGTCGGTGAATCGCCGCCGGCCACCGAGTCGCAGTGCGGCGAGTTACAGAGTTCTAATGAACCTACTACAGAGTCCAATTTAGAAACCCTAGCTTCTGCCGTTCCCTCTTCGGTTGAATCCCTTGTTGTGCAGCATCGGATTGCCGATTTGCAGGAGAGTTCTACCATGCTGAATTCGTGCGGCAAAGCCGAAAGTAAGGAGACAGTTGGACCTCCTGAAAAGGAAACTATAGCAAGAGAAGCAGTCCAGGAACCCCCAACTCCAATAGAAAATCAGCGTCAGGTGTCTATGTGTTCAACTCCACTGTCTGAACTATCACCAACTTCTGTCACACAATCTTTATCATCTGTTCCTAGTCCAACTGCACCAAAACAGAAAATGTCTCCTCCGAAGGTTAATGACATGCATGTGCCGGAAGTAGTAAAAAATGTTCCTTCTGGTGGTAAAACCTTATCTGCTGTTTCTGTTCCAAGGTCATCAGCATCTGATGGATACAACTGGCGAAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTAGTGCTAAGAAAATTGAATGCTGTGATCATTCAGGTCATATGACAGAGATTGTTTATAAAAGTGAACACAGTCATGATCCCCCCAAGAGGACTCATTCCATAAGGGAAAGTAAGTTTGTGTCTTCCAATGAACCTACTGTAGAAAACAGTGTTCCAGAGAAGCCTATCAGAGCTCTGCCTATCAGAGTTCTGCAGGATTCTGATCCATCCATTTCTTCCAAAGAACCTCTACAAGAAGCACCTTGCTGTGCTGATAAGAAACGACAAAACTCATCTAATATCAGTGACGATAGTAAAGTTATTTTGAAGGAAGAACCTGTAAATGAGCCAGAGCCAAAACGAAGAATGAAGAAAGGTGACTTAACGGACTTGGATTCTGCCGTAAAACCTGGAAAGAAAGCCAAGTTTGTTGTACATGCAGCAGGCGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCCAGAAATTACTATAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCATATTGAGTCTGCTATAGATAACTCAAATGCTGTCATCATAACGTACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAAAGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTACCTCCATGAACAATTTGCAGTTAAAGAAACCTGACTCACCGCAAAACCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACTGGGGAAGCCTTGGACCTTGGGGGTGAGAAAGCAATGGAGTCCGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1560 0.459 MAEHLSSEALPGGAPELHRKGEDSERNGEEVEEKAGEIKERVGESPPATESQCGELQSSNEPTTESNLETLASAVPSSVESLVVQHRIADLQESSTMLNSCGKAESKETVGPPEKETIAREAVQEPPTPIENQRQVSMCSTPLSELSPTSVTQSLSSVPSPTAPKQKMSPPKVNDMHVPEVVKNVPSGGKTLSAVSVPRSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCSAKKIECCDHSGHMTEIVYKSEHSHDPPKRTHSIRESKFVSSNEPTVENSVPEKPIRALPIRVLQDSDPSISSKEPLQEAPCCADKKRQNSSNISDDSKVILKEEPVNEPEPKRRMKKGDLTDLDSAVKPGKKAKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAIDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPTSMNNLQLKKPDSPQNQKISTQWSVDTEGELTGEALDLGGEKAMESARTLLSIGFEIKPC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 128 163 - -
Gabi4651g00006 519 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 140 476 IPR044810 GO:0003700
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 254 270 - -
Gabi4651g00006 519 SMART WRKY_cls 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 SMART WRKY_cls 380 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 98 206 - -
Gabi4651g00006 519 FunFam WRKY transcription factor 366 441 - -
Gabi4651g00006 519 ProSiteProfiles WRKY domain profile. 375 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 SUPERFAMILY WRKY DNA-binding domain 376 440 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 300 331 - -
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 15 44 - -
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 50 68 - -
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 189 206 - -
Gabi4651g00006 519 SUPERFAMILY WRKY DNA-binding domain 200 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 1 68 - -
Gabi4651g00006 519 ProSiteProfiles WRKY domain profile. 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 MobiDBLite consensus disorder prediction 254 284 - -
Gabi4651g00006 519 Gene3D WRKY domain 190 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 Gene3D WRKY domain 365 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 Pfam WRKY DNA -binding domain 204 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4651g00006 519 Pfam WRKY DNA -binding domain 382 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00006 Gabi-Chr4651 82141 91885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00006 115 519 WRKY Transcription Factor Family AT4G30935 53.810 1.65e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4651g00006 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00006 - - gmx:100127377 763.837