Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4648g00004 ATGACCCTTCGTCTTCAAATAGCATTTAAGATTAAGGGTATTAAATTACAAGTTCGTGAAATCAAGGAAAGAAGTGAAAGAGATGGCTTCCTAATCCAATCTTCTTTGGAACAGGCACCAGCCACTTCTAGCAGAAACCGAGACGTCACATTGCATAACCTTCAAATGCTTCCTTTTTACATTGAGGAAGCTGATGTTGTGGGCTTTGAAGTCCCTAAAGCTGAATTGATTGGTTGGTTGGTAAAGGGAAGAGCGAAGCGCACTGTCATCTCTTTGATAGGAATGGGAGGGCAAGGGAAAACTACTCTTGCCAAGAAAGTTTTTGATAACAAAGAAGTGATTGGGTACTTCAATTGCCATGCATGGGTCACAGTATCTCAGTCGTACACCGTGGATGGATTGTTGAGGGACATGTTGCAACAATTTTGCAAAGAAAAGAAGGAGGTTCCTCCTGCTGATATTGCTACAATGAATCGAGACTCATTGATAAAGGAAGTAAGAAGCTACTTGCAGCAAAAGAGATACGTTGTCCTCTTTGATGATGTATGGAATGAACATTTCTGGGATGAAATTGAATTTGCTTTAATTGATGATGAAAACGGAAGCAGGATATTTATCACAACTAGAGACATGCGTGTTGCAAGTTGTTGTAAAAAAACTTCTTTTGTTGAAGTGCATGAGCTACAACCATTAACTCATGAGAAATCCTTTGAGTTGTTCTGTAGGAAGGCATTCAGATATGATTTGAACGGATGTTGTCCACAAAACCTTATGGGTATATCTTCCGAAATTGTTAAAAAATGTGAGGGTTTGCCACTAGCAATTGTGGCCATTGGTGGCCTTTTATCTACCAAAGGTAGAGATGCATTTGAATGGGAATTTTTTAGTCAAAATCTAAGTTTAGAATTGCATAAGAATTCCCATTTAGATGCTATAACAAAGATTTTAGCTTTTAGTTATCATGATTTGCCTTACTATCTCAAAGAATGTTTCTTGTATTTTGGAATATATCCAGAAGACCATGAAGTTAAATCAAAAAGATTGATTCGGCAATGGGTAGCTGAGGGATTTATCAAACAAGAAGGGAGAAAAACTTTGGAAGAAGTTGCAAAAGAATATTTAACAGAGTTGGTTAATAGAAGTTTGGTGCAAGTCTCTTCATTAACCATGGATGGTAAAATTAGGAGTTGTCGCATTCATGACCTATTGCGCGACATGATCCTTAGAAAGTGTAAGGATTTGAGTTTTTGTCACTTTATTAGTGAAGATGGTGAGTCTGACTTAAGTGGGATAGTTAGGCGTCTATCAATATCAAGCAGAGCTGATAGTTTAATGAGAAGTATTGAAAGCTCAGACGTTCGATCCTTGTTTGTTTTTATACGTGAAGATTTATCTGAAGACTTTGTGAAGATTCTCTTTACGAATTCCAAGCCATTGAAGGTACTTGATTTTGAAGATGCGGGAGTCTATCATGAAGATGCAACAATTGATCGTATTGTTAAGAATTTGGGGGATTAA 1518 0.3729 MTLRLQIAFKIKGIKLQVREIKERSERDGFLIQSSLEQAPATSSRNRDVTLHNLQMLPFYIEEADVVGFEVPKAELIGWLVKGRAKRTVISLIGMGGQGKTTLAKKVFDNKEVIGYFNCHAWVTVSQSYTVDGLLRDMLQQFCKEKKEVPPADIATMNRDSLIKEVRSYLQQKRYVVLFDDVWNEHFWDEIEFALIDDENGSRIFITTRDMRVASCCKKTSFVEVHELQPLTHEKSFELFCRKAFRYDLNGCCPQNLMGISSEIVKKCEGLPLAIVAIGGLLSTKGRDAFEWEFFSQNLSLELHKNSHLDAITKILAFSYHDLPYYLKECFLYFGIYPEDHEVKSKRLIRQWVAEGFIKQEGRKTLEEVAKEYLTELVNRSLVQVSSLTMDGKIRSCRIHDLLRDMILRKCKDLSFCHFISEDGESDLSGIVRRLSISSRADSLMRSIESSDVRSLFVFIREDLSEDFVKILFTNSKPLKVLDFEDAGVYHEDATIDRIVKNLGD 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4648g00004 505 Gene3D - 230 319 IPR042197 -
Gabi4648g00004 505 PANTHER DISEASE RESISTANCE PROTEIN RP 15 485 IPR044974 GO:0006952
Gabi4648g00004 505 Gene3D - 320 411 IPR036388 -
Gabi4648g00004 505 Gene3D - 55 225 IPR027417 -
Gabi4648g00004 505 Pfam NB-ARC domain 73 321 IPR002182 GO:0043531
Gabi4648g00004 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 334 IPR027417 -
Gabi4648g00004 505 FunFam Probable disease resistance protein At1g63360 320 409 - -
Gabi4648g00004 505 PRINTS Disease resistance protein signature 169 183 - -
Gabi4648g00004 505 PRINTS Disease resistance protein signature 474 490 - -
Gabi4648g00004 505 PRINTS Disease resistance protein signature 89 104 - -
Gabi4648g00004 505 PRINTS Disease resistance protein signature 268 282 - -
Gabi4648g00004 505 FunFam Probable disease resistance protein At1g61300 52 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4648g00004 Gabi-Chr4648 79452 80969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4648g00004 90 287 WRKY Transcription Factor Family AT5G45050 29.648 4.59e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4648g00004 K13457 - mtr:25489074 613.224