Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4647g00005 ATGGACACCAAACTGTTAACAATTCGCACTCTTGTCTCCACCCTCACCTCCCCCTCCGACCAAACCCGACTCGCCTCCCTCCGCCACCTCCACCGCATCTCCAACCAAGATCCCACCGCCCGACCCCTCATCTCCGCCGCCGGCGCTATCCCCCTCCTCGCCGAAGCCCTCTACTCCCTCTCCCACCCCATCCAAGAACACGCCGCCGCCACCCTCCTCAACCTCTCAATCTCCGACCGCCAACCCCTCATCTCCTCTCCCACCCTCCTCGACGCCCTCTCCCACGTCCTCTCCCGCCACGCCTCCACCTCCTCCCCCGCCGCCGTCCAGTCCTCCGCCGCCACCCTCCACAGCCTTCTCGCCGTCGTCGCCGAATACCGCCCTGTCGTCGGCGCCAAGCACAACATCCTTCGCGCCCTCGTTGACATCATCGGCGGTCCCAATTCGCCGACGAGGTCAGTAAAAGATGCACTCAAGGCGTCCTTCGCCGTGGCACTTCACCCACCGAACCGGACCGACCTGATCCGGTTCGGCGCGGTACCTGCGATTTTTAATCTGATGGCGAAGGACAAGAAGAGAAAAAGTGGCATCGTTGAGGATGCCACTGCAGTAATTGCACAAATTGCAGGGTGTGAGGAAAGTGAGGTGGCGTTTCGGAACGTTTTGGGGATTCCAGTGTTGTTGGGTTTGTTATGTTTGGATCATGAGAAGTGTAGTTTGAGGACCAAAGAGAATACGGTTTCGGGTTTGTTGAATTTGGTTAGGTACGGAGGAGAGAGTGTTATTGGGGAGGTTAGAGAAAGAGTTGAGGCGTTGGATTGGATCGTGTATGTGCAAGAACATGGTAGCGCCAAAGGGAAGAGTAAAGCCGTGGCGTTGTTGAAGATATTGCTTGATGGCGGAAGCAATGATAAAATTGTTGAAGATTTGTATCCTGTTGAATCAAACTTGTAA 954 0.5608 MDTKLLTIRTLVSTLTSPSDQTRLASLRHLHRISNQDPTARPLISAAGAIPLLAEALYSLSHPIQEHAAATLLNLSISDRQPLISSPTLLDALSHVLSRHASTSSPAAVQSSAATLHSLLAVVAEYRPVVGAKHNILRALVDIIGGPNSPTRSVKDALKASFAVALHPPNRTDLIRFGAVPAIFNLMAKDKKRKSGIVEDATAVIAQIAGCEESEVAFRNVLGIPVLLGLLCLDHEKCSLRTKENTVSGLLNLVRYGGESVIGEVRERVEALDWIVYVQEHGSAKGKSKAVALLKILLDGGSNDKIVEDLYPVESNL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4647g00005 317 Gene3D - 192 310 IPR011989 -
Gabi4647g00005 317 Pfam Armadillo/beta-catenin-like repeat 42 76 IPR000225 GO:0005515
Gabi4647g00005 317 PANTHER U BOX DOMAIN-CONTAINING 8 297 - -
Gabi4647g00005 317 SUPERFAMILY ARM repeat 7 300 IPR016024 -
Gabi4647g00005 317 FunFam ARM repeat superfamily protein 2 302 - -
Gabi4647g00005 317 SMART arm_5 37 77 IPR000225 GO:0005515
Gabi4647g00005 317 SMART arm_5 167 210 IPR000225 GO:0005515
Gabi4647g00005 317 SMART arm_5 211 255 IPR000225 GO:0005515
Gabi4647g00005 317 Gene3D - 3 191 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4647g00005 Gabi-Chr4647 69899 70852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4647g00005 8 297 U-box Gene Family AT5G67340 32.990 3.85e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4647g00005 - - gmx:100803111 409.453