Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4642g00009 ATGGATAATGATTCTGAGATTAGAACCTATCCTGATATAGGTGAGCTTGCATTTGGAAAAACAGGAAGATTACTAGTATCTGTATCCATGTACACGGAGCTCTACTTAGTTGTAACAGGGTTCTTGATTCTAGAAGGGGATAACTTGAGTAATTTATTCCCTGATATGAAGCTTCAAGTAGCTGGTTTAACAATTGGTGGAAATCAATTCTTTGTGATAATGGTTGCCCTTATTATCTTGCCTACAGTTTGGTTGGATAACTTGAGTCTACTTTCTTATATATCAGCAAGTGGAGTGTTTGCTTGTGCTATAATCATATTCTCAGTATCATGGACGGCAACAATGGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAATTGGAATGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTTTTGTGCACAACCAGTCTTTCCCACCTTGTACAATTCCATGAGAAGCAAGCACCAATTTTCTAGTGTCCTACTTGTATGCTTTATATTAACCACTATTGGTTATGCATCCATGGCTATAATTGGTTACCTGATGTTTGGTTCAGAGGTTCAATCACAGGTAACTTTAAACCTGCCACTGAACAAATTAAGCTCACGTGTAGCAATATATACTGCCTTGGTTAGTCCCATATCCAAGTATGCTTTGATGATAACACCGATTACCAATGCTTTGAAAGATATGATACCAAGGAAGCACAAGAATAGTGTCACTCACATCATAATTGGCACTGTCATGGTAATCAGCACTGTCATCGCTGCCCTGACTTTTCCTTTCTTTGGGCATCTCATGTCACTGGTTGGAGCTTTACTAGGTGTCACGGCTTCTATTCTGCTTCCATGTTTGTGCTACTTAAAGATTTCAGGCATTTACAGGAAATTTGGGACTGAGACGGTAGCCATAGTGGCCATAATAATAGCAGCTGTAGCAATGGCAATATCTGGGACATACACATCAGTTATGCAAATAGTCCACAGTTTGTAA 1008 0.3929 MDNDSEIRTYPDIGELAFGKTGRLLVSVSMYTELYLVVTGFLILEGDNLSNLFPDMKLQVAGLTIGGNQFFVIMVALIILPTVWLDNLSLLSYISASGVFACAIIIFSVSWTATMDGVGFHQKGTLVNWNGIPTAVSLYAFCFCAQPVFPTLYNSMRSKHQFSSVLLVCFILTTIGYASMAIIGYLMFGSEVQSQVTLNLPLNKLSSRVAIYTALVSPISKYALMITPITNALKDMIPRKHKNSVTHIIIGTVMVISTVIAALTFPFFGHLMSLVGALLGVTASILLPCLCYLKISGIYRKFGTETVAIVAIIIAAVAMAISGTYTSVMQIVHSL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4642g00009 335 PANTHER OS05G0424000 PROTEIN-RELATED 8 318 - -
Gabi4642g00009 335 Pfam Transmembrane amino acid transporter protein 3 326 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4642g00009 Gabi-Chr4642 56746 63244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4642g00009 1 335 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.929 3.48e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4642g00009 K15015 - gmx:100794374 521.161