Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4639g00005 ATGAAGCATTCTTCACAAAAGAAAAATGGTCCTCCTGTTACACCATCAGTGGCTACTGAAAAGAAATCAGGAGATCATCCTTTGGAGAAAGAGAGGAAAAAAGATGCCCCTCCTCCACGAATGCAATTTGATGACAAAAGCAGAGTGGAAAAGGCTAAAAGGCGTGCAGTAGTCAATCAAACTGAAGCTACAAACAGAGTTGAATTATTTCGACATTTGCCTCAATATGAACATGGGAATCAACTTCCTAAACTTGAATCAAAGCTTTTTAAACTTGATTCAGTGCATCCTGCTGTGTTCAAGGTTGGATTGCATTATTTGACAGGAACTATATCAGGGAGTAATGCTCGTTGTATTGAAATGCTAAGAGCATTTCAAGAAGCCATTAGAGACTACTCCACACCGACTGAAAAAGCCCTTGTTAGGGATTTAACTGCAAAAATCAGTAGTTATGTTTCATTTTTTACTGAATGCAGACCTCTTTCTATTAGCATGGGAAATGCAATTAATTTTGTAAAGAGTCGTATAGCCAAGTTGCCTTTCAATCATACTGAATCTGAGGCAAAAACAGCTCTTTGTTCTGATATTGATAGATTCATTAATGAGAAAATAATTCTTGCTGATAAGGTGATTGTTGGACATGCTGCTCCAAAGGTTAGAGATGGAGATGTTCTTCTTACATATGGATCGTCATCTGCTGTTGAGATGATTCTTTTATATGCCCATTATCTTGGGAAACAGTTCCGTGTTGTGGTGGTGGACTCTCGACCAAAGCTTGAAAGTCAGGCCTTACTTCGCAGGCTTGTTGCCAAGGGCCTGAGTTGTACATATACTCATATAAATGCTGTTTCTTATGTCATGCATGAGGTTACACGAGTTTTTCTGGGAGCTTCTGGCGTTCTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTGCCTGTGTTGCAATGGTGGCTCATTCATTCCGTGTTCCTGTATTGATCTGTTGTGAAGCTTATAAGTTTCATGAAAGGGTGCAACTTGATTCCATATGTTCCAATGAACTAGGTGACCCAGATGCTGTTGCCATTGTTCCTGGAAGAAAGGATGTCAATTATCTGCACAATTGGACTAGTGAAAACAATTTGCAGCTTTTGAATTTGATGTATGATGTCACTCCTTCAGATTATGTCTCGGCAATTGTTACGGATCATGGAATGATCCCTCCTACAAGTGTGCCCGTAATTGTACGAGAGTATGGACGAGAGCACTTGATATAG 1260 0.3984 MKHSSQKKNGPPVTPSVATEKKSGDHPLEKERKKDAPPPRMQFDDKSRVEKAKRRAVVNQTEATNRVELFRHLPQYEHGNQLPKLESKLFKLDSVHPAVFKVGLHYLTGTISGSNARCIEMLRAFQEAIRDYSTPTEKALVRDLTAKISSYVSFFTECRPLSISMGNAINFVKSRIAKLPFNHTESEAKTALCSDIDRFINEKIILADKVIVGHAAPKVRDGDVLLTYGSSSAVEMILLYAHYLGKQFRVVVVDSRPKLESQALLRRLVAKGLSCTYTHINAVSYVMHEVTRVFLGASGVLSNGTVYSRVGTACVAMVAHSFRVPVLICCEAYKFHERVQLDSICSNELGDPDAVAIVPGRKDVNYLHNWTSENNLQLLNLMYDVTPSDYVSAIVTDHGMIPPTSVPVIVREYGREHLI 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4639g00005 419 SUPERFAMILY NagB/RpiA/CoA transferase-like 95 413 IPR037171 -
Gabi4639g00005 419 MobiDBLite consensus disorder prediction 22 51 - -
Gabi4639g00005 419 Gene3D - 207 413 IPR042529 -
Gabi4639g00005 419 Pfam Initiation factor 2 subunit family 111 403 IPR000649 GO:0044237
Gabi4639g00005 419 MobiDBLite consensus disorder prediction 1 51 - -
Gabi4639g00005 419 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 5 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4639g00005 Gabi-Chr4639 23521 30005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4639g00005 18 419 Eukaryotic Initiation Factors Gene Family AT5G38640 75.871 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4639g00005 K03680 - gmx:100778711 717.998