Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4635g00001 ATGAGATTGGGAAGCTGGAACATAGGAACCTTAACAGGTAAATTGAGGGAGTTGGCAGATGTTTTTGCTAGAAGGAAAATGAATATTGTTTGTTTGCAAGAAACTAAGTGGGCTGGAGAAAAGGCTAAGGAAGTGGATGGAACTGGTTTCAAGTTATGGTACATAGGTACGAACAAGAGTCCAAATGGTGTTGGAATTATGATTGATAAAAGTTTCAGGGATAAAGTTGTGGACGTCAAAAGGAAAGGCGACAGGATTATTCTGGTTAAGCTTGTTGTGGGTGACTTAATTCTGAATATCCTCATTGTGTATGCACCCCAAATTGGATTGCAACCAACTGATAAAAGCCAATTTTGGGAAGACTTGGAGGAGAATGATTTCGTTCCAGTAATTGTGCACTATATAGTTGAAATGAAAATCTTAGACTTTCTTGATTATGATATTCAAATCTGCATAGCTGCTTATATGCTGGTGCCTTTTTATATCTACTATGTTTTGTTTTTGCAAGGAGACATTGAGAGGAGTAAGGTGATTGAATTTTGGTTCATTGGACCCATGGAGTTCAACAAGGATATGGCTGTGAGGGCTAAGCAAACTGCTGAACGTAGAATGCAAAAAGGAGAATTTGTCGAGGCACTGATGTTTGCTACGATGGCCAAAAGATTGTACGCTGACGTTGAAAACATAGCTCAGATCCTTACGGTTTGTGAGGTTCACAATGCTGCAAAGAACAAACTCTTTGGGTCTGACATGGACTGGTATAGAATTCTTCAGACTGAAGGATTGGCTGATGAAGCAACCATAAAGAAACAGTACAGGAAGCTTGCGCTACTACTTCATCCTGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGGGTGTTGAGTGACCAAGCAAAACGTTCATCATATGATATGAAGTTTAGAACCTTTGCAAAAACTGCAGCACCTAAGACCTCATACCATCCCTCAAATGGGAATACATTCTCCGCCAAACATAGTGTAAATGCAACAAATGATCAGAAGAATTCTGATTCAAACTCCACTTTTAGGAATGCCCATCAGCAAGCTGAACAACAGACATTCTGGACATCTTGCAAACATTGTAATACTAAGTACCAATACTACAAATTTTTTGTTAATGCAACCTTACGCTGTCTAAAATGTTTGAAAACATTTACAGCTCAAAATTCTGCCTACCAAGGGGTCCCACCAGTAGATACATGGACATCATCTAATTTCCAGAAAGTGACTCTTGTGCATGGTCCGCCAAAACCGGCCTCAGAAAGTAATGGTGGAAAATCCCTTGGTGGAGAACATGCAAACGAGTTTGTGCGGTCATATCCTTCATCTGTGCAAAAAGATGCTACTGGTGGTGGTGAGCATTGTAAAGGTAGAAAGAAAAAAGATGGCTATCTTCCTGCGTCCAAAGCCAGAGATTCACAAACCTCAACAAATGTCGGAAGTAAGAGAGTAAGGCAGTCAGCACCAGATTCAAGAGAAAGTTCAACCGCTGGAAATGGTGATGACATGAAAGATGCCAATGTTCGAGAAAATGGTGTTGATCCTTCAAGACTTAATGCTAGGAGACCTTCCAGGCAAAAGCGGCATGTTTTATATGTGGAAATCTCTGAAGATGATGATGATTTTGAGATGCCTTCCAAAAAGGCACAACAAAATGAATCATTTACCGCCAATGAAGTTGAGGAAAAGAACGTGCCTGCAAGTGGTGGGTTGTCCAATAATAATAATCCAACTAGTTCTGCTGCTGGTGTGCTTGATCAGAACAGAGAGGTGAGAAATAAGGTAAGTAGTTCATCTGAAGAAATATTTTTAAAGAATAAAAGCAAAATTGAGCAGTCTCGTGTTCAAAGAAAGAAAGTATCCGAGTTAGATCCTGATCATAGAACGTCAAAAGTGGACAACTGTTCTCCATTGAATTCGAATGTGCCGAACAATCCAGAGATCATTCAATTTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAAGGCAGAGGGTTGTTTTGCTGTTAATCAATTCTGGGCAATTTATGATCCCATTGACGCAATGCCTAGGTTTTATGCTCTAGTTAAGAAAGTGGCTTCCCCTTTCAAGTTGCAGATTACTTGGTTGGAACCTAACCCAAATGACCAAGGTGGGATTGTTTGGCATGCTGCAGACTTGCCTATTGCTTGCGGTAAATTCAAACTTGGTGGTTCTCAGAAAACTACAGATCGTGCTATGTTCTCTCATCAGATGCACTGCATAACAAGAATTCGCAAAGGTTCTTTTCTGGTACATCCTAAGAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCTAATCCAGAAAATTATTTGAAGTTTGAATATGAGTATGTGAAAATCCTATCAGATTTTGCAGAGAAAGTTGGCATTGAAGTTGCTTATCTGGGAAAAGTGAAAGGGTTTGTTAGCCTCTTTCAGATAAATGAGAAGAATGGAGTGAACTTATTTTGTGTTCCACCTAATGAGCTATATAGGTTCTCACATCGAATTCCCTCATATAAGATGACTGGTAATGAAAGGGAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCAGGACTGCCTATTAATCTATTGAAGGTTGGTGATGTGAAGATGGAGAATGGAATATTAAATACTGGAGTGGAATAG 2724 0.3968 MRLGSWNIGTLTGKLRELADVFARRKMNIVCLQETKWAGEKAKEVDGTGFKLWYIGTNKSPNGVGIMIDKSFRDKVVDVKRKGDRIILVKLVVGDLILNILIVYAPQIGLQPTDKSQFWEDLEENDFVPVIVHYIVEMKILDFLDYDIQICIAAYMLVPFYIYYVLFLQGDIERSKVIEFWFIGPMEFNKDMAVRAKQTAERRMQKGEFVEALMFATMAKRLYADVENIAQILTVCEVHNAAKNKLFGSDMDWYRILQTEGLADEATIKKQYRKLALLLHPDKNKFAGAEAAFKLIGEANRVLSDQAKRSSYDMKFRTFAKTAAPKTSYHPSNGNTFSAKHSVNATNDQKNSDSNSTFRNAHQQAEQQTFWTSCKHCNTKYQYYKFFVNATLRCLKCLKTFTAQNSAYQGVPPVDTWTSSNFQKVTLVHGPPKPASESNGGKSLGGEHANEFVRSYPSSVQKDATGGGEHCKGRKKKDGYLPASKARDSQTSTNVGSKRVRQSAPDSRESSTAGNGDDMKDANVRENGVDPSRLNARRPSRQKRHVLYVEISEDDDDFEMPSKKAQQNESFTANEVEEKNVPASGGLSNNNNPTSSAAGVLDQNREVRNKVSSSSEEIFLKNKSKIEQSRVQRKKVSELDPDHRTSKVDNCSPLNSNVPNNPEIIQFPDPDFSDFEKDKAEGCFAVNQFWAIYDPIDAMPRFYALVKKVASPFKLQITWLEPNPNDQGGIVWHAADLPIACGKFKLGGSQKTTDRAMFSHQMHCITRIRKGSFLVHPKKGETWAIFRDWDIKWSSNPENYLKFEYEYVKILSDFAEKVGIEVAYLGKVKGFVSLFQINEKNGVNLFCVPPNELYRFSHRIPSYKMTGNEREGVPSGSFELDPAGLPINLLKVGDVKMENGILNTGVE 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 467 483 - -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 485 512 - -
Gabi4635g00001 907 SUPERFAMILY Chaperone J-domain 248 316 IPR036869 -
Gabi4635g00001 907 Gene3D Endonuclease/exonuclease/phosphatase 1 133 IPR036691 -
Gabi4635g00001 907 Gene3D DnaJ domain 249 373 IPR036869 -
Gabi4635g00001 907 Pfam Domain of unknown function (DUF3444) 663 869 IPR024593 -
Gabi4635g00001 907 PRINTS DnaJ domain signature 288 308 IPR001623 -
Gabi4635g00001 907 PRINTS DnaJ domain signature 272 287 IPR001623 -
Gabi4635g00001 907 PRINTS DnaJ domain signature 254 272 IPR001623 -
Gabi4635g00001 907 ProSiteProfiles dnaJ domain profile. 252 316 IPR001623 -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 427 541 - -
Gabi4635g00001 907 SMART dnaj_3 251 308 IPR001623 -
Gabi4635g00001 907 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 188 892 - -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 630 661 - -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 325 361 - -
Gabi4635g00001 907 Pfam DnaJ domain 252 313 IPR001623 -
Gabi4635g00001 907 CDD DnaJ 252 305 IPR001623 -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 513 527 - -
Gabi4635g00001 907 SUPERFAMILY DNase I-like 1 123 IPR036691 -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 581 600 - -
Gabi4635g00001 907 MobiDBLite consensus disorder prediction 630 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4635g00001 Gabi-Chr4635 33978 41879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4635g00001 189 440 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.897 7.67e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4635g00001 - - aprc:113873604 946.036