LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4634g00070	ATGTCCGCTGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAGCAGGCCGAGAGATATGAAGAAATGGTTGAATGTATGAAGAAAGTAGCAAAACTTGATCTTGAGCTCACTGTGGAAGAGAGGAACCTCCTCTCGGTGGGATATAAAAATGTTATTGGTGCACGGAGAGCCTCTTGGCGCATTATGTCCTCAATTGAGCAGAAGGAAGAGGCTAAGGGAAATGAACATAATGTTAAACTGATCAAGAGTTACTGCCAAAAGGTTGAGGAGGAACTGTCCAAAATTTGCGGTGACATTCTGACAATTATAGACCAGCATCTCGTTCCTTCTTCCACCTCAGCAGAAGCTAATGTTTTCTACTGTAAGATGAAAGGTGATTATTTCCGGTATCTTGCAGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCTGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTTTATTATGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTCGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCCGATTTGCCAGAGGATGGAGGTGAGGATAACATAAAAACTGAAGAAGCCAAACCTGCTGAGCCTGAGTGA	777	0.4492	MSAEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEEAKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLVPSSTSAEANVFYCKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEEAKPAEPE	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4634g00070	258	ProSitePatterns	14-3-3 proteins signature 1.	45	55	IPR023409	-
	Gabi4634g00070	258	PANTHER	14-3-3 PROTEIN	7	237	IPR000308	-
	Gabi4634g00070	258	Coils	Coil	13	33	-	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	208	237	IPR000308	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	39	68	IPR000308	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	88	112	IPR000308	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	119	141	IPR000308	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	154	180	IPR000308	-
	Gabi4634g00070	258	PRINTS	14-3-3 protein zeta signature	181	207	IPR000308	-
	Gabi4634g00070	258	Coils	Coil	195	215	-	-
	Gabi4634g00070	258	Gene3D	-	1	249	IPR036815	-
	Gabi4634g00070	258	SUPERFAMILY	14-3-3 protein	6	237	IPR036815	-
	Gabi4634g00070	258	SMART	1433_4	7	249	IPR023410	-
	Gabi4634g00070	258	MobiDBLite	consensus disorder prediction	235	258	-	-
	Gabi4634g00070	258	FunFam	14-3-3 protein epsilon	1	249	-	-
	Gabi4634g00070	258	MobiDBLite	consensus disorder prediction	241	258	-	-
	Gabi4634g00070	258	Pfam	14-3-3 protein	13	235	IPR023410	-
	Gabi4634g00070	258	PIRSF	14-3-3	1	248	IPR000308	-
	Gabi4634g00070	258	ProSitePatterns	14-3-3 proteins signature 2.	217	236	IPR023409	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4634g00070	Gabi-Chr4634	630262	633364	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4634g00070	3	256	14-3-3 family	AT1G26480	84.942	4.10e-164	453

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi4634g00070	-		K06630	gmx:100529129	494.582