Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4634g00053 ATGAGCGGAACGAAGGGGAAGAAGAAGGGGGCGAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGATAAGATAATGGACATAGCTTCCCTTGAGAAGTTCCTTCAGGAGAGGATTAAAGTTGGCGGCAAGGCCGGTGCACTCGGTGATTCCGTTACCGTCACTCGGGAAAAGAGTAAGATCACCGTCACCTCCGACAGCAACTTCTCTAAACGGTATCTCAAATACTTAACCAAGAAGTACTTGAAAAAACACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGAACGGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4833 MSGTKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4634g00053 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Gabi4634g00053 119 Gene3D - 1 119 IPR038526 -
Gabi4634g00053 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gabi4634g00053 119 PANTHER 60S RIBOSOMAL PROTEIN L22 4 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4634g00053 Gabi-Chr4634 448307 449991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4634g00053 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.793 4.84e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4634g00053 K02891 - gmx:100500073 222.246