Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4634g00048 ATGATCAGAATATCACACCTTAAGCTATTCCTTCCATTTATGTTTCTTTCCTGCCTTGCAAATACTGGCCAATTGGTATTTGCAAAGGGAAAAGAGAATGTTAGAGATGCTTGCAGAGTAACTAGGTATCCAGACCTTTGTATCCGCTCGCTAGCACCATTCTCTAACAGTGTTGGAAGAAGTCCCAGCAAGTGGGCAAGGGAAGCAGTGTCAGTAACAATTGGCGAGGTTAAGAATGTTCAAGCATATCTTGCAAAGTTGAAGAAGCACGGGCTTATAAGAGGAAGAAACAGAGTTGCACTTTCAGATTGTGTTGAGTCTTTTGCAGATGCCCTTGATGAGCTTCACAGATCTCTGAGTGTGCTCAGAAGGTTGAGCAGAAGCACGTTTGGTACCCAAATGGGGGACGTCAATACATGGATAAGTGCAGCACTCAGTGATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAAGGAGAGGAAAACCAAATTGCTGCGAAATCGGGTTCTTAAAGTATATTATATAACCAGTAACGCTCTAGCTCTTGTCAATAAACTTGCCACTACAGGTCTAGGAAGCATATCTGATCCATAG 597 0.4271 MIRISHLKLFLPFMFLSCLANTGQLVFAKGKENVRDACRVTRYPDLCIRSLAPFSNSVGRSPSKWAREAVSVTIGEVKNVQAYLAKLKKHGLIRGRNRVALSDCVESFADALDELHRSLSVLRRLSRSTFGTQMGDVNTWISAALSDEDTCLDGFQGKKERKTKLLRNRVLKVYYITSNALALVNKLATTGLGSISDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4634g00048 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 183 - -
Gabi4634g00048 198 FunFam Pectinesterase inhibitor 3 29 188 - -
Gabi4634g00048 198 CDD PMEI-like_3 37 189 - -
Gabi4634g00048 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 189 IPR035513 -
Gabi4634g00048 198 NCBIfam pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
Gabi4634g00048 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
Gabi4634g00048 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Gabi4634g00048 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4634g00048 Gabi-Chr4634 406880 408124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4634g00048 34 195 Carbohydrate Esterase AT3G14310 31.737 5.55e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4634g00048 - - gmx:100791264 245.743