Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4634g00017 ATGCATTGCTTCGACAACAAAGCAATGATGAACGAGCAAGTTGTTTCAGCACAGTCAGAGAAGCAAGTAATGGTGGTTGGCATAGACGACAGCGAGCACAGCTCGTACGCACTGAAATGGACTCTTGATCACTTCTTCCCCAACCCAATGTTCAAGCTTGTTCTTGTCCATTCGAGGCCTTCTGCTACTTCTGCTGTTGGCCTCGCTGGCCCTGTGTATGCAGGAGCTGCTGAGGTTTTGCCTATTGTGGATTCCGATTTGAGAAAGATTGCAGCCAGAGTTGTCGAAACTGCTAAACAACTCTGCATCAAGAATTCCGTAAATGATGTAATAGCGGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGAAGCTGTGGAGAAGCACCATGCTTCAGTATTGGTGGTGGGTAGTCATGGTTATGGGGCAATAAAAAGGGCGGTTTTAGGTAGTGTAAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAGACCAAACACTGA 528 0.464 MHCFDNKAMMNEQVVSAQSEKQVMVVGIDDSEHSSYALKWTLDHFFPNPMFKLVLVHSRPSATSAVGLAGPVYAGAAEVLPIVDSDLRKIAARVVETAKQLCIKNSVNDVIAEVVEGDPRNVLCEAVEKHHASVLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4634g00017 175 PRINTS Universal stress protein signature 147 169 IPR006015 -
Gabi4634g00017 175 PRINTS Universal stress protein signature 21 39 IPR006015 -
Gabi4634g00017 175 PRINTS Universal stress protein signature 129 141 IPR006015 -
Gabi4634g00017 175 CDD USP_Like 24 168 - -
Gabi4634g00017 175 Gene3D HUPs 9 175 IPR014729 -
Gabi4634g00017 175 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 171 - -
Gabi4634g00017 175 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 18 175 - -
Gabi4634g00017 175 Pfam Universal stress protein family 23 169 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4634g00017 Gabi-Chr4634 252308 254968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4634g00017 34 170 Plant U-box Gene Family AT5G57035 28.378 1.13e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4634g00017 - - gmx:100816212 276.174