Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00098 ATGTCGAAGGTGGTATGTGTGACTGGCGGGAGTGGATGCATTGGGTCATGGGTGGTTCATCTCCTTCTAGATCGCGGCTACACCGTCCACGCCACCGTCCAAAATCTCAACGATGACACCGAAACGAAGCATCTAGAAGCCCTCGAAGGAGCACCCACGCGCCTCCGTCTCTTCCAGATCGATCTCCTCGACCACGACTCCATCATCGCCGCAGTCCGTGGCTGCGCCGGCGTTTTCCACCTCGCCTCCCCATGCATCGTCGACCAAGTCCATGACCCTCAGAAGGAGCTTCTGGATCCCGCGATTAAGGGCACCATGAATGTCCTTGCGGCGGCCAAGGAAGCAGGTGTGCAGCGCGTGGTTCTCACTTCCTCCATCTCCGCGATTATCCCTAGCCCCTCTTGGCCTTCTGATGTTGTCAAGACAGAGGATTGCTGGACTGACATTGAATACTGCAAGCAAAAAGGGTTGTGGTATCCAATGTCCAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGTACTGTCATGGGCCCTGTTATTCCACCAAGACTTAATGCTAGTATGCTCATGCTTCTGCGCCTTCTTCAAGGCTGCGCTGATACATACGAGAACTTTTTCATGGGATCGGTCCACTTTAAAGATGTAGCATTGGCGCATATTTTGGTGTATGAGAACAAAGCAGCAGCTGGCAGGCATATGTGCGTTGAAGCTATCTCTCACTATGGCGACTTTGTCGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTGCCTAGGATACCACGGGATACCCAACCAGGATTGTTGAGAGCAAAGGATGGGTCGAAGAAACTTATGGATTTGGGTTTGCAGTTCATTCCAATGGAGAAAATTATTAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGGTTCATTTCTTGA 963 0.5005 MSKVVCVTGGSGCIGSWVVHLLLDRGYTVHATVQNLNDDTETKHLEALEGAPTRLRLFQIDLLDHDSIIAAVRGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLAAAKEAGVQRVVLTSSISAIIPSPSWPSDVVKTEDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLLRLLQGCADTYENFFMGSVHFKDVALAHILVYENKAAAGRHMCVEAISHYGDFVAKVAELYPEYNVPRIPRDTQPGLLRAKDGSKKLMDLGLQFIPMEKIIKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00098 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Gabi4624g00098 320 Gene3D - 1 320 - -
Gabi4624g00098 320 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
Gabi4624g00098 320 CDD FR_SDR_e 5 297 - -
Gabi4624g00098 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
Gabi4624g00098 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00098 Gabi-Chr4624 891366 893593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00098 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.044 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00098 - - gmx:100803241 575.859