Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00097 ATGTCGAAGGTGGTATGTGTGACTGGCGGGAGTGGATGCATTGGGTCATGGGTGGTTCATCTCCTTCTAGATCGCGGCTACACCGTCCACGCCACCGTCCAAAATCTCAACGATGACACCGAAACGAAGCATCTAGAAGCCCTCGAAGGAGCACCCACGCGCCTCCGTCTCTTCCAGATCGATCTCCTCGACCACGACTCCATCATCGCCGCAGTCCGTGGCTGCGCCGGCGTTTTCCACCTCGCCTCCCCATGCATCGTCGACCAAGTCCATGACCCTCAGAAGGAGCTTCTGGATCCCGCGATTAAGGGCACCATGAATGTCCTTGCGGCGGCCAAGGAAGCAGGTGTGCAGCGCGTGGTTCTCACTTCCTCCATCTCCGCGATTATCCCTAGCCCCTCTTGGCCTTCTGATGTTGTCAAGACAGAGGATTGCTGGACTGACATTGAATACTGCAAGCAAAAAGGGTTGTGGTATCCAATGTCCAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGTACTGTCATGGGCCCTGTTATTCCACCAAGACTTAATGCTAGTATGCTCATGCTTCTGCGCCTTCTTCAAGGTGAATTATATATAGGCTGCGCTGATACATACGAGAACTTTTTCATGGGATCGGTCCACTTTAAAGATGTAGCATTGGCGCATATTTTGGTGTATGAGAACAAAGCAGCAGCTGGCAGGCATATGTGCGTTGAAGCTATCTCTCACTATGGCGACTTTGTCGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTGCCTAGGATACCACGGGATACCCAACCAGGATTGTTGAGAGCAAAGGATGGGTCGAAGAAACTTATGGATTTGGGTTTGCAGTTCATTCCAATGGAGAAAATTATTAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGGTTCATTTCTTGA 978 0.4959 MSKVVCVTGGSGCIGSWVVHLLLDRGYTVHATVQNLNDDTETKHLEALEGAPTRLRLFQIDLLDHDSIIAAVRGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLAAAKEAGVQRVVLTSSISAIIPSPSWPSDVVKTEDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLLRLLQGELYIGCADTYENFFMGSVHFKDVALAHILVYENKAAAGRHMCVEAISHYGDFVAKVAELYPEYNVPRIPRDTQPGLLRAKDGSKKLMDLGLQFIPMEKIIKDAVESLKNKGFIS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00097 325 CDD FR_SDR_e 5 302 - -
Gabi4624g00097 325 FunFam Cinnamoyl-CoA reductase 1 1 325 - -
Gabi4624g00097 325 Gene3D - 1 325 - -
Gabi4624g00097 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 315 - -
Gabi4624g00097 325 Pfam NAD dependent epimerase/dehydratase family 5 250 IPR001509 -
Gabi4624g00097 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 319 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00097 Gabi-Chr4624 891366 893593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00097 3 325 Monolignol Biosynthesis Gene Families AT5G58490 75.851 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00097 - - gmx:100803241 571.237