Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00090 ATGGCTGCAACCTTGGAGTGTTGGTCCAGCCGCGCCGGCGCCGGCACCGGCACCGACGAGGAGATGGTGGAACAGGTTCTCATGAGGACCAACCACAGATCGGAAGGTGCGGTCTCTTCCTCCACCAAAGACTCCTCCACCCTCGTCCACAAGAAGTTGCAGAAGCTGAGCCGCAACGTTTCTGAGGCTATAACCTCCTTCAAGAACTCCCTTAACCTCAATTTGAACCCGGATTCTCCTTCTTCTTCTTCTTCCAAGAACGATGGCTCTTCTCGGAAAGTTGCGTGGGGTAGTGTCGTTCGCAACCTCACCCTGCTCTACCCTGGAAGCCAGCTTCCTGAGAAGCTCATGTCCAATATTCGCAAGCATTATGATTCCTTGCCTCTCAGTTATGCACAAGCAGAATTTGATATGAAAGATGTGTTTCTCCACATCAAGTTGATGGAGCAAGCATCAGAAGGTGACCAATCTGCGATATTGATTCAAGAAGAGTGTGATGATGAAGTTCGGGGGTCTGTGTTGAAGCTCACGTTTGCTTGCAACTCTCCAATTTCATGGCCTGCAATGTCGGGTGCATTAGATAGTTCATCCATTTCCTGCAAGAAGATGCAGATCTTTGAGAAGAAAGGTTTTACACTGGGGGTTGTTCTTCTTGTTGTTCAGTCTGGCCATGATAAATTGGTCAGGACCCGGGTTGAAAATGCTTTGAAGTTTGCTATGAAGAAGCCCAAAACCAGTTCTGTGAAGCTTCCCTTTGGACTTTGTGGATGTCAGGAAGAGAATTCCAAGGGGAGAGAACTCGGGGAGATTGATGAAGACTTTGGTGATGCATACCATGGAAAGGAGTTCGAGAATTCGAGCCAAAAGATTCAGCTTCAGGTGCCCTTGCCTGCTTCATCTTTTATCGTATCAGTAGATGAATGGCAGACGATAAAGTCAGGAGGAGATGAGATTGAAAAATGGTTGTTGAACTCGGATAGTGTTGAGTTTACAGAACAGATTGGGCCCAATTCATATAAGGGGTTCTACATGGGAAAAAGGGTTGGAATTGAGAAGCTGAAAGGTTGTGACAAAGGAAATTCTTATGAATTTGAGCTCCACAAAAATCTGCTGGAACTGATGTCCTGTGGGCATAGAAACATTCAGCAATTCTGTGGTATTTGTGTGGATGATATTCATGGATTATGTGTAGTGACTAAGTTCATGGAAGGTGGGTCTGTTCATGATTTAATGTTGAAGAACAAGAAGATACAGACTAAGGATATTGTGAGAATCGCAGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGACCATGGTGTTGCATACAGAGACCTCAATACGCAGAGGATTCTATTGGATAGGCATGGGAATGCTTGCTTGGGGGATATGGGTGTAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATAGAGTATGAAACTGATGGTTATAGGTGGCTAGCACCAGAGATAATTGCAGGGGATCCAGAGAGTGTCACAGAGACATGGATGAGTAACGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTACATTTTCACCTGTGCAGGCAGCAGTAGGCATTGCTGCTTGTGGCCTTAGACCTGAAATCCCCAAGGACTGCCATCAAACTCTAAAATATATTATGGCCAAGTGCTGGAATAACACTCCTTCTAAACGTCCTCAGCTATCTGAAATTTTAGCAATATTGATGCGACCAAACAACAACAATAGGTAA 1761 0.4514 MAATLECWSSRAGAGTGTDEEMVEQVLMRTNHRSEGAVSSSTKDSSTLVHKKLQKLSRNVSEAITSFKNSLNLNLNPDSPSSSSSKNDGSSRKVAWGSVVRNLTLLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASEGDQSAILIQEECDDEVRGSVLKLTFACNSPISWPAMSGALDSSSISCKKMQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKKPKTSSVKLPFGLCGCQEENSKGRELGEIDEDFGDAYHGKEFENSSQKIQLQVPLPASSFIVSVDEWQTIKSGGDEIEKWLLNSDSVEFTEQIGPNSYKGFYMGKRVGIEKLKGCDKGNSYEFELHKNLLELMSCGHRNIQQFCGICVDDIHGLCVVTKFMEGGSVHDLMLKNKKIQTKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGVVTACKSVGEAIEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSTFSPVQAAVGIAACGLRPEIPKDCHQTLKYIMAKCWNNTPSKRPQLSEILAILMRPNNNNR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00090 586 ProSiteProfiles Protein kinase domain profile. 328 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4624g00090 586 Pfam Protein tyrosine and serine/threonine kinase 363 577 IPR001245 GO:0004672|GO:0006468
Gabi4624g00090 586 SUPERFAMILY Protein kinase-like (PK-like) 318 578 IPR011009 -
Gabi4624g00090 586 MobiDBLite consensus disorder prediction 71 91 - -
Gabi4624g00090 586 Gene3D Transferase(Phosphotransferase) domain 1 322 583 - -
Gabi4624g00090 586 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 87 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00090 Gabi-Chr4624 790155 794401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00090 311 580 MAP Kinase Kinase Kinase AT2G17700 32.852 2.04e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Gabi4624g00090 PK_Tyr_Ser-Thr 6.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00090 - - pvu:PHAVU_008G258400g 1017.3