Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00083 ATGAGAGACCTTACAAAGAGAAAGATTGGTGGTCACTTGGCAGAAGAGCAATCATGTCCAAAGAAACCAACTCTAGTTAAACCACTTCCTCTAAGGGCTCCAGCTAAAGTGCTTTTAGGAACTGGCTCATCATTTCAACCATGGAATAAACCCTCCGGGAACATTATTGGCCTTGGTATTGCAGAGGCTAGCAGCAGCGGAATGGAGAACAATAAACAGAACATAGAGAACTCAAATTCTGATCATCCTGCAAAGGAGAACCCCACCAATGGTGGTGGTGCTACTACTGACGACAACACTACCAAAACTGATTGCAACACTAAACCAGAAATAATGGATAGGAAGCTCAAGCGAATCATTTCAAACCGACATTCTGCACAGAGATCTAGAATGAAGAAAAAAGCGTATGTGGAGGATTTGGAAAGCAAAGCAAAATCTTACAAGGAAAAGATAGCCCAACTCCATCCACAAATTGAAGCCGAACAATCTCAGCTCCACTTATTGCAAATTAATCAGCATAAATTGAAACTACATATGGCTGCTCGTGAAAAGCAAAGAATACTTCAAGAAGTTGCGATTGAAAAGAACAGAGCTGAAGTGGATAGGCTGAGGGAACTCCAAAGGAAATTAATAGCTGAAGCTCAGGCCAGGATGATGAATTCGGGTGCTTCTTTGCAGCTGATATCCAATTCCAACTTAAACCCTTCAGGCTTGGGAGGGTTGGCTCACAAAAACTTCGATCAAGCTCTAAATGGAGTAGAAACATCAAAAAGGCAAGTTGATAATGCCCAACCACCACAAAGTCAGAGCCAAATGGGGATAGCAAAATGGGATAACAGAAGATCAATTCTCAATTTCAACTTAGTGAAGTCCGAACCGGAATCATGA 888 0.4189 MRDLTKRKIGGHLAEEQSCPKKPTLVKPLPLRAPAKVLLGTGSSFQPWNKPSGNIIGLGIAEASSSGMENNKQNIENSNSDHPAKENPTNGGGATTDDNTTKTDCNTKPEIMDRKLKRIISNRHSAQRSRMKKKAYVEDLESKAKSYKEKIAQLHPQIEAEQSQLHLLQINQHKLKLHMAAREKQRILQEVAIEKNRAEVDRLRELQRKLIAEAQARMMNSGASLQLISNSNLNPSGLGGLAHKNFDQALNGVETSKRQVDNAQPPQSQSQMGIAKWDNRRSILNFNLVKSEPES 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00083 295 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 117 132 IPR004827 GO:0003700|GO:0006355
Gabi4624g00083 295 Gene3D - 113 169 - -
Gabi4624g00083 295 MobiDBLite consensus disorder prediction 1 15 - -
Gabi4624g00083 295 PANTHER BASIC LEUCINE ZIPPER 34 64 234 - -
Gabi4624g00083 295 MobiDBLite consensus disorder prediction 1 27 - -
Gabi4624g00083 295 MobiDBLite consensus disorder prediction 67 102 - -
Gabi4624g00083 295 SMART brlzneu 110 173 IPR004827 GO:0003700|GO:0006355
Gabi4624g00083 295 SUPERFAMILY Leucine zipper domain 114 168 IPR046347 GO:0003700|GO:0006355
Gabi4624g00083 295 Pfam Basic region leucine zipper 114 160 IPR004827 GO:0003700|GO:0006355
Gabi4624g00083 295 MobiDBLite consensus disorder prediction 256 275 - -
Gabi4624g00083 295 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 169 IPR004827 GO:0003700|GO:0006355
Gabi4624g00083 295 MobiDBLite consensus disorder prediction 67 107 - -
Gabi4624g00083 295 Coils Coil 193 213 - -
Gabi4624g00083 295 CDD bZIP_plant_RF2 115 164 IPR044759 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00083 104 204 bZIP Transcription Factor Family AT5G07160 34.653 6.91e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4624g00083 bZIP_2 2.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00083 - - ccaj:109816036 204.142