Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00073 ATGTCTTGCTCCGTCGCAGTTTCCAATTCGCCGGTGTTCTCTCCTTCTTCCTCCCTCTTTTGCACGAAGCAATCCATCATCACTTCCTCACCGGAAGCCCTAAACCTTTCCCTCTCTCATCTCAAGAACGCTTCTTCTTCTACGGCGTCGTCTTGCTCCTCCTCCTCTTCCCCTTCTTCTTCTTCCTCACCTTCCTCTCCCTTCCGCCTTCGCCTTCCTAAGCCTCTCACCGCCTTCTCTGCCTCCACTCCCTCCTCCACCTCCCCCAACGCCACCGTTTTGAAGAGGAAGAGACCGGCCAAGCTTGACATACCCATTTCTTCTCTCACCTTTGGAGTTCCGGCGACGCCGTCCGCGGTGGCACGTGATGTCGTTGAGGCTGAGGGAGAGGGGTTTACTGTGTATTGCAAGAGAGGAAGGAGGGAGTACATGGAGGATCGTTACACAGCTGGAGATAATCTACGCGGAGAACACAAACTGGCCTTTTTTGGTATATTTGATGGGCACGGAGGTGCAAAAGCTGCTGAATTTGCTGCTAGGAACTTAGAAAAGAATGTCTTGGATGAAGTGATCATAAGAGATGAAGATGATGTTGAGGAGGCAGTGAAGCGTGGGTACCTCAACACGGATTCTGATTTCTTAAAAGGGGATCAGCACGGTGGCTCTTGCTGTGTAACAGCATTGATTAGGAATGGTAACCTTGTTGTGTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGAGGTGTTGCAGAGGCCCTAACATCTGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGATTTGGAGGATCCAGGGATCTCTTGCTGTATCTAGGGGACTTGGAGATCGACACCTGAAACAATGGGTGACAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGACGGATTGTGGGATAAGGTTAGTAACCAGGAAGCAGTAGATATTGCTCGTCCTTTTTGCGTAGGGAACAACAAACCGCAACCATTGCTGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACTAGTGTTATGCTAATCAAATTGGAGCACTATATCTGA 1128 0.4858 MSCSVAVSNSPVFSPSSSLFCTKQSIITSSPEALNLSLSHLKNASSSTASSCSSSSSPSSSSSPSSPFRLRLPKPLTAFSASTPSSTSPNATVLKRKRPAKLDIPISSLTFGVPATPSAVARDVVEAEGEGFTVYCKRGRREYMEDRYTAGDNLRGEHKLAFFGIFDGHGGAKAAEFAARNLEKNVLDEVIIRDEDDVEEAVKRGYLNTDSDFLKGDQHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIEIWRIQGSLAVSRGLGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARPFCVGNNKPQPLLACKKLVDLSVSRGSMDDTSVMLIKLEHYI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00073 375 Pfam Protein phosphatase 2C 133 363 IPR001932 -
Gabi4624g00073 375 SUPERFAMILY PP2C-like 132 372 IPR036457 -
Gabi4624g00073 375 CDD PP2Cc 131 371 IPR001932 -
Gabi4624g00073 375 PANTHER PROTEIN PHOSPHATASE 2C 62 369 IPR015655 GO:0004722|GO:0006470
Gabi4624g00073 375 ProSiteProfiles PPM-type phosphatase domain profile. 131 371 IPR001932 -
Gabi4624g00073 375 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Gabi4624g00073 375 Gene3D - 123 374 IPR036457 -
Gabi4624g00073 375 SMART PP2C_4 124 369 IPR001932 -
Gabi4624g00073 375 MobiDBLite consensus disorder prediction 45 68 - -
Gabi4624g00073 375 FunFam probable protein phosphatase 2C 25 124 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00073 Gabi-Chr4624 587720 590011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00073 1 375 PP2C-type Phosphatase Gene Family AT2G30020 61.194 8.02e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00073 K17506 - gmx:100797934 577.4