Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00072 ATGTCTTGCTCCGTCGCAGTTTCCAATTCGCCGGTGTTCTCTCCTTCTTCCTCCCTCTTTTGCACGAAGCAATCCATCATCACTTCCTCACCGGAAGCCCTAAACCTTTCCCTCTCTCATCTCAAGAACGCTTCTTCTTCTACGGCGTCGTCTTGCTCCTCCTCCTCTTCCCCTTCTTCTTCTTCCTCACCTTCCTCTCCCTTCCGCCTTCGCCTTCCTAAGCCTCTCACCGCCTTCTCTGCCTCCACTCCCTCCTCCACCTCCCCCAACGCCACCGTTTTGAAGAGGAAGAGACCGGCCAAGCTTGACATACCCATTTCTTCTCTCACCTTTGGAGTTCCGGCGACGCCGTCCGCGGTGGCACGTGATGTCGTTGAGGCTGAGGGAGAGGGGTTTACTGTGTATTGCAAGAGAGGAAGGAGGGAGTACATGGAGGATCGTTACACAGCTGGAGATAATCTACGCGGAGAACACAAACTGGCCTTTTTTGGTATATTTGATGGGCACGGAGGTGCAAAAGCTGCTGAATTTGCTGCTAGGAACTTAGAAAAGAATGTCTTGGATGAAGTGATCATAAGAGATGAAGATGATGTTGAGGAGGCAGTGAAGCGTGGGTACCTCAACACGGATTCTGATTTCTTAAAAGGGGATCAGCACGGTGGCTCTTGCTGTGTAACAGCATTGATTAGGAATGGTAACCTTGTTGTGTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGAGGTGTTGCAGAGGCCCTAACATCTGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACTCTGGGTGGCTACGTTGATTTATGTCGTGGTGTTTGGAGGATCCAGGGATCTCTTGCTGTATCTAGGGGACTTGGAGATCGACACCTGAAACAATGGGTGACAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGACGGATTGTGGGATAAGGTTAGTAACCAGGAAGCAGTAGATATTGCTCGTCCTTTTTGCGTAGGGAACAACAAACCGCAACCATTGCTGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACTAGTGTTATGCTAATCAAATTGGAGCACTATATCTGA 1161 0.4866 MSCSVAVSNSPVFSPSSSLFCTKQSIITSSPEALNLSLSHLKNASSSTASSCSSSSSPSSSSSPSSPFRLRLPKPLTAFSASTPSSTSPNATVLKRKRPAKLDIPISSLTFGVPATPSAVARDVVEAEGEGFTVYCKRGRREYMEDRYTAGDNLRGEHKLAFFGIFDGHGGAKAAEFAARNLEKNVLDEVIIRDEDDVEEAVKRGYLNTDSDFLKGDQHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETLGGYVDLCRGVWRIQGSLAVSRGLGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARPFCVGNNKPQPLLACKKLVDLSVSRGSMDDTSVMLIKLEHYI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00072 386 SUPERFAMILY PP2C-like 132 383 IPR036457 -
Gabi4624g00072 386 ProSiteProfiles PPM-type phosphatase domain profile. 131 382 IPR001932 -
Gabi4624g00072 386 CDD PP2Cc 131 382 IPR001932 -
Gabi4624g00072 386 Gene3D - 131 385 IPR036457 -
Gabi4624g00072 386 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Gabi4624g00072 386 SMART PP2C_4 124 380 IPR001932 -
Gabi4624g00072 386 FunFam probable protein phosphatase 2C 25 124 385 - -
Gabi4624g00072 386 PANTHER PROTEIN PHOSPHATASE 2C 62 380 IPR015655 GO:0004722|GO:0006470
Gabi4624g00072 386 MobiDBLite consensus disorder prediction 45 68 - -
Gabi4624g00072 386 Pfam Protein phosphatase 2C 133 374 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00072 Gabi-Chr4624 587720 590011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00072 1 386 PP2C-type Phosphatase Gene Family AT2G30020 63.184 1.74e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00072 K17506 - gmx:100797934 618.231