Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00062 ATGAAGCTCTTGACATCATCTTATTCATCATCTCCATCATCTTCATCCACCCTCAGTTTTGACCCAACTTTGTGCAACTCCAAAAGTGCTACTGCAGGGTGTCTCACAGCCATCTTGCGCAGGATTCTCTGCTCTGGTGGCCTTCAAACACAACCATCAAACACAATCAGAGAACTTGATTCAATGTCAATGGCGAGTGGCAATGTTCATGAATTGAAGGGTAAGCAAAAGACAGAAGCTTCTACTACCACTGCTCCTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGAGTCAATGGGTGAAGCAAACCCAAGTTCACTATCACGTAGCCGATCCATGAACTCTGTGAACTACTTGGGGGAATGCAAGCGAATGCAGGGTCTACATAGGCGTGTTAAGTCTTCATCATCTTCGTTTTGTGAGGTGCCAACTTTCCACTTGCTTGAAAATGAGAACTTCTTGGTGTTCAGCTTCGAAAATGGAGGTGAGAGTAAAGAATTCAAGTCCAGAGGGAGTAAAAAAGAAACGAGTTCTGCAGAGTCGAAGCAGAAACGAGAAGAGAGACGCGAGTTAGAGAAAAACAAGAGAAAAAAAGGGCATGTTGAGAAGGAAAACTTGAGCAGAAGGGTGTCTGATATGTCTTCTGTCAATGTTGGAAATGATGTTAAACTTGAATTTGCTAACACTTTGCCTCTGTTCAACGTTTCTTCTGAAAAGGAGCACATGGATTCAGAAGCACTGAGATTCTCACAGCCCGTGAAGAGAAATGAAGTTACCAATGCTGAGAAAGTGAAGAAGAGAAAGAAGGGAACAACCTGTTACAAAGAAAAGAAGGTAGAAACTGAATGTAGTTCAGAAGATTCAAGCCCAGTTTCTGTCTTTGATTTTGAGCGTGAAGCTTCTGGAACAGAGGTAGATTCTTTTGGTGTTAGTATGAGTTGGAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGCTCTTTACTCTGCATTCAAATAGTAATTTGATGATTGAAGAAGGGAAGGTTAAGGCAATTGAGAACAACAAACATGAAGAATCTAAGAAAAAAGAGAAGCAAAGCCAAGAGTATGTAGATATTTGGGGTGAAATTTGCAGGCTTGCTGAAGATGAATTGGTTGGATCAAGTCAGTTAGAGGAACGAACGAAGAAACAAGGTGATTTTGAAAGTGTAAGTGCTGATTTTGAGTCAGAAATTTTTGATCACTTGTTAAATGAGCTTATAGATCAACTTGTTGAGAACCCCTTGAAAGCATTGCAACTTCAGAATTTGTAA 1296 0.4082 MKLLTSSYSSSPSSSSTLSFDPTLCNSKSATAGCLTAILRRILCSGGLQTQPSNTIRELDSMSMASGNVHELKGKQKTEASTTTAPPGIVARLMGLESMGEANPSSLSRSRSMNSVNYLGECKRMQGLHRRVKSSSSSFCEVPTFHLLENENFLVFSFENGGESKEFKSRGSKKETSSAESKQKREERRELEKNKRKKGHVEKENLSRRVSDMSSVNVGNDVKLEFANTLPLFNVSSEKEHMDSEALRFSQPVKRNEVTNAEKVKKRKKGTTCYKEKKVETECSSEDSSPVSVFDFEREASGTEVDSFGVSMSWRRKLSPELENDQLFTLHSNSNLMIEEGKVKAIENNKHEESKKKEKQSQEYVDIWGEICRLAEDELVGSSQLEERTKKQGDFESVSADFESEIFDHLLNELIDQLVENPLKALQLQNL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00062 431 MobiDBLite consensus disorder prediction 163 212 - -
Gabi4624g00062 431 Coils Coil 174 204 - -
Gabi4624g00062 431 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4624g00062 431 Coils Coil 343 363 - -
Gabi4624g00062 431 Pfam DUF761-associated sequence motif 81 99 IPR032795 -
Gabi4624g00062 431 MobiDBLite consensus disorder prediction 163 209 - -
Gabi4624g00062 431 PANTHER OS05G0128300 PROTEIN 5 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00062 Gabi-Chr4624 481004 482792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00062 27 418 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 31.658 1.72e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00062 - - gmx:102660974 487.263