Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4624g00036 ATGGAAAGTGGAGGAAGTTTTGGTAATAATGGCGTTCAAATTTATGGGAGTGAAAATATTAACGCCATTAACCCTTCCATGCATAGATCAGGCCCTCCTTTGACATCTATAGATAGGTTCTTATGGGGCCAACAGAACCACTTCCCTCAGCAGCAAAATGTAGAGAACGTTGCAAGGAACAACGATGCAAGTGTCTTTACTAATGAGTTCTTCAGTTTTTCCTGCTCTGGTGGTTCATCTCATAGGTTTCTATGGCCTAACACTCAAGAATCAAGCTTTGTTGGTGGGATCTTAGCAAATGAAGAGGCTTTGACGTGGACAAACATCAACCAAACCCCCACATTGTTCCTGAAAGATGTCCAAAAGAATGCAAAATTGGTGGGAAGGAGAACTAAGAAAGGGTCTGTTGGTCCTTTGATCAAAGGACAGTGGTCATCTGAAGAAGACAGGAAACTGAAAAGTTTGGTGAAGAGATATGGTGAAAGAAAATGGGCTCAAATTGCTGAGAAATTGGAAGGAAGGGTTGGCAAGCAGTGTCGAGAGAGATGGAACAATCATTTGCGTCCTCATGTTAAGAAAGATAGCTGGAGTGAAGAAGAAGAGATGATATTAGTAGATAAACATTCTAAGATGGGAAACCGTTGGGCTGAGATAGCAAAGTACATTCCAGGGAGAACAGAGAATGCTATAAAGAACCATTGGAATGCAACTAAAAGGAGGCAGAATTCAACTAGAAAGAACAAGAAGACAGAGAAATCTAATGGAAAACCCCACTCCTCTATTCTTGAAGACTATGTCAGAAGCAAGAACACTTCCATGAACCCCACAACAGGCATCATCACTGAAACAGCTACAATAATCACCAAGCTCTCTAGCTCCCAAGTGACACTCTCTGAGGACCCTGCAAATAACGAATTAAACCTTGTGTTATCTGAACCCTCTCAATCTGTTGCCAATGAGCTACTCTTCATGGAAGAAATTTTCACTGAGAATCAGAATCAGCATATTGTTGATGATGTGAATCAATTTGGGTTTGACTATTCCATCCAGTACCCAGATATCATGCACTTGGATGATAGTTTATTCCTCCGCAGTTGA 1098 0.4117 MESGGSFGNNGVQIYGSENINAINPSMHRSGPPLTSIDRFLWGQQNHFPQQQNVENVARNNDASVFTNEFFSFSCSGGSSHRFLWPNTQESSFVGGILANEEALTWTNINQTPTLFLKDVQKNAKLVGRRTKKGSVGPLIKGQWSSEEDRKLKSLVKRYGERKWAQIAEKLEGRVGKQCRERWNNHLRPHVKKDSWSEEEEMILVDKHSKMGNRWAEIAKYIPGRTENAIKNHWNATKRRQNSTRKNKKTEKSNGKPHSSILEDYVRSKNTSMNPTTGIITETATIITKLSSSQVTLSEDPANNELNLVLSEPSQSVANELLFMEEIFTENQNQHIVDDVNQFGFDYSIQYPDIMHLDDSLFLRS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4624g00036 365 Pfam Myb-like DNA-binding domain 144 201 - -
Gabi4624g00036 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 242 IPR017930 -
Gabi4624g00036 365 MobiDBLite consensus disorder prediction 233 261 - -
Gabi4624g00036 365 CDD SANT 195 238 IPR001005 -
Gabi4624g00036 365 SMART sant 192 240 IPR001005 -
Gabi4624g00036 365 SMART sant 140 189 IPR001005 -
Gabi4624g00036 365 FunFam Transcriptional activator Myb isoform A 140 193 - -
Gabi4624g00036 365 Gene3D - 140 192 - -
Gabi4624g00036 365 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Gabi4624g00036 365 PANTHER MYB PROTEIN-RELATED 114 254 - -
Gabi4624g00036 365 CDD SANT 144 187 IPR001005 -
Gabi4624g00036 365 ProSiteProfiles Myb-like domain profile. 141 187 IPR001005 -
Gabi4624g00036 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 191 IPR017930 -
Gabi4624g00036 365 SUPERFAMILY Homeodomain-like 139 234 IPR009057 -
Gabi4624g00036 365 Gene3D - 195 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4624g00036 Gabi-Chr4624 268340 270488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4624g00036 27 268 MYB Transcription Factor Family AT5G58850 46.400 3.90e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi4624g00036 Myb_DNA-bind_6 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4624g00036 K09422 - aprc:113874412 406.757