Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4620g00006 ATGGCTTTGGTACTCGTTGGTGGAGCTTTTTTGGGTGCTGTCTTTAATGTATTGCTTGATAGAATAGCTTCACCGGAGATAGTGAGCTTCTTGAAAGGGAAGAAACCAAACTACAAGTTGCTGAAAAAGTTGAAGCTGATTTTGTTGTCACTTAATGGAGTTCTTGATGCTGCAGAGGGAAAGCAAATTACAAATATAGCAGTCAAGGAATGGCTTGATGAACTTAAAGATGCTGCATATGAGGCTGATGATCTACTGGATGAGGTTTTTACTAGAGCTAAATATGGTGCAGCTGAGGTAAGAAACTTTGACTCTACTTGTAGCTCATATGACAAAGAACTTGAAGAAAACATGGAGGAGATCATTGATAAATTAGATTTTATTGCAAGTCAGAAAGATGTCCTTGGTCTCACAGGGGGGTTAGGAGTCAAACTGTCTCAAAAAACTCCAACAACATCTTTGATTGATGGGTCTAATGTATATGGAAGAGATGATGATAAAGAAGACATAATTAAGCTACTGTTTGATGTTGAAAGTGGTGATAACAAGATAGGAGTGATTCCCATAGTTGGTATGGCTGGAATTGGAAAAACCACCTTAGCTCAACTTGTATACAACGATGACAGAGTGAAGGAAAAATTTGATCTCAGAGCTTGGGTTTGTATTGCTGAAGAATTTGACATTTTTAAGATTACAGAAACAGTTTTGGAGATTCTTACTATGTGCAATTATGGAATTAGAGATCTGAATTCACTTCAAGTTGAACTAAAGAAAAGGCTGATGGGAAAGAAATATTTATTTGTTCTGGATGATGTGTGGAACGAGAACTATGTTGATTGGGATATACTGAGAAATCTTTTTCAATATGGTGCTCAAGGGAGTAAGATCATTGTGACTACTCGAAGTGAGCATGTAGCATCAATAATGCAAACTATTCCATCATATCATTTGAGATATTTGTCAGATGATGATTGTTGGATGTTGTTTGAAAAACATGCATTTGATTATAGAAGCTCAAGAACAAACCTGATTTTGGAAGAGATGGGTAAACAAATTGCTAAAAAATGTAAGGGATTGCCTCTTGCAGCAAAAACATTAGGAGGGCTCTTACGCTCAAAAACAGAAGTCAAAGATTGGGAGAACATATTGAACAGTGACATATGGGAGTTGTCAGATACAATGAGCAATGTTCTTCCAGCTCTGAGATTAAGTTATTATTACCTTCCTTCACATTTAAAACGATGCTTTGCTTATTGTTCAATATTCCCCAAAGGTTATGAATTTAACAAGGAGGAGTTGGTATTGTTGTGGATGGCAGAAAATTTACTACAAGAACCAAGGAGGAATAAGAGAATTGAAGAAGTTGGAGATGAGTACTTTCACGAACTGGTATCCAGGTCATTTTTTCAACAATCAAGAAATGGTGAATCACTCTTTGTGATGCATGATCTTATAAATGACTTAGCTCAATATGTATCTGGAAAATTTTGCATCAGATTAGAAAATGACTCAAATGAAGAAGCAGAGAAAAGAACTCGTTATTTATCACAAATTATTGCATGCAGATACCCCTCCATAAACTTTGAGGCTTTCCACAAAGCAAATGGTCTGCGCACCTTTTTGCCACTTAGCTCAGTAGATCCACCTATATGCATTTTCAACAAGGTGCCATTTGATCTATTGACCAAGTTAAGGAGTTTGAGGGTTCTATCTTTGGTTGGTGCCCGTGGCAGTATCTATGATTTGCTCCACTTCATTGGCAAACTAAGACATCTAAGATACTTAGATGTGTCTGATACTCAAATCAAAAAGTTGCCTTGTTCCATCTGCACCTTATACAACTTGCAAACATTGAAGGCAGCAAGATGTCCTAATCTCACAAAATTGCCAAGAAATATGCATTGTCTTGTAAATTTAAGATATCTTGACATCACAGGAACTTGCCTAGAAGGGATGCCACTGCACATGAGTAACCTAAGCAGCCTCCAAAAGTTGAGCAATTTTGTTGTGGGCAGAGAGCATGCTTCTTCAATTGGTGAACTAGGGGAACTATCTCATCTACGAGGTTCTTTGAAGATCCAAAACTTAAAACATGTGGTTGATCCTAATGATGCAATGAAGGCAAAGATTAAGGACAAGAAAAACCTTGACCAGTTGAGTTTAGATTGGGGTCGGGCTGCTGATACAGATAATTCCCAGCATGAAAAAGACATACTTGACAAGCTACAGCCACATACCAACTTGGAAGTTCTTGACATACAGCATTATACTGGTACACAATTTCCAACTTGGCTGGGAGATCATTCATTCTTCCACCTAGTTTGTCTTTCTCTTAAACATTGTAAATACTGCTACATAATGCCACCACTTGGGCAGCTTCCTTCTTTGAAAGAACTTCATATTTCAAAGTTTAAGGGTCTTGTTAGCATTGGACCAGAATTCTATGGGGTTGGTTGTTGTGCAAGGAATCATCAGCCTTTTCCTTCTCTTGAAATTCTGACATTTTATAGTATGCCAGCATGGGAGAAATGGACTCATCATGAAGTTGATCATGAAAGCTGCAGAGCTTTCCCTTGTCTTAGAGAGCTTCATCTGGAGGAATGTCCCATTCTACTTGGGGATTTGCCTATTTATCTTCCATCTCTTACAAATCTTACCATGAGAGACTGTAAGCAGCTTGCTACTTCATTTCCAAGTGCTCCCTCTATACGTACAATTGACAATTGTTGGAAAGTAGAATTGCTAGAACAAATAAATGGGTGCCACCAGTCACTTGAATCATTAGAGATCCACAATAGTTGCTTCTCTCTCAAGTCTTTCCCATTGGATTTCTTTCCCAGCCTGAAGTCTCTAGTCATCTGGGGTTGTGAAAATCTTGAATATCTAACTGCTTCTGTTCAACTTGAGCTCCTCACTTCTCTCCATTCATTGTGTATATGGAGATGTCCTAATTTTGTAGCTTTTCCTAATGGAGGATTGCCAACACCCAATCTTACATCATTGAAAGTCCGCTACTGCAACAAGTTAAGGTCACTTCCTGAAAGAATGCAAAGTTTTCTCACAAGTTTAAAGGAACTCCTAGTATGGAGTTGTCCAGAAATTGAGTCACTTCCAAATGGGGGTTTGCCTACTAATTTGGAATCATTCAAAATCAGGGATTGTGACAAACTCATTACTCACAGGCTAGAGTGGAATATGTCATGTCTAACCTCCCTTTTACACTTTTCTGTTGAGGGAAAATGTGAAGATGTGGAGTCCTTTCCAGACGAAGGTTTTCTGCCTCCCACTCTTACCCAATTAGAGATTCGTGGATTATCAAATCTCAAAACTTTGGATAGCAAAGGGCTTCAAAATCTCACATCTCTCAAGAAATTGAAGATACTTGATTGTTGTAAGCTTGAGTCATTAGGAGAAGAAGTTACATTGCCTAATTCTACAGTTGATCTTGACATTTGGAAGTGTCCTTTACTACAAGAACAATGGGAGAGCAACAACAGGCCCAAGATTTCTGAACCTGGCATTTGGATATGTGACAGACACATTAAATTGGATGAGCTGCAGCACTTGTAA 3570 0.3826 MALVLVGGAFLGAVFNVLLDRIASPEIVSFLKGKKPNYKLLKKLKLILLSLNGVLDAAEGKQITNIAVKEWLDELKDAAYEADDLLDEVFTRAKYGAAEVRNFDSTCSSYDKELEENMEEIIDKLDFIASQKDVLGLTGGLGVKLSQKTPTTSLIDGSNVYGRDDDKEDIIKLLFDVESGDNKIGVIPIVGMAGIGKTTLAQLVYNDDRVKEKFDLRAWVCIAEEFDIFKITETVLEILTMCNYGIRDLNSLQVELKKRLMGKKYLFVLDDVWNENYVDWDILRNLFQYGAQGSKIIVTTRSEHVASIMQTIPSYHLRYLSDDDCWMLFEKHAFDYRSSRTNLILEEMGKQIAKKCKGLPLAAKTLGGLLRSKTEVKDWENILNSDIWELSDTMSNVLPALRLSYYYLPSHLKRCFAYCSIFPKGYEFNKEELVLLWMAENLLQEPRRNKRIEEVGDEYFHELVSRSFFQQSRNGESLFVMHDLINDLAQYVSGKFCIRLENDSNEEAEKRTRYLSQIIACRYPSINFEAFHKANGLRTFLPLSSVDPPICIFNKVPFDLLTKLRSLRVLSLVGARGSIYDLLHFIGKLRHLRYLDVSDTQIKKLPCSICTLYNLQTLKAARCPNLTKLPRNMHCLVNLRYLDITGTCLEGMPLHMSNLSSLQKLSNFVVGREHASSIGELGELSHLRGSLKIQNLKHVVDPNDAMKAKIKDKKNLDQLSLDWGRAADTDNSQHEKDILDKLQPHTNLEVLDIQHYTGTQFPTWLGDHSFFHLVCLSLKHCKYCYIMPPLGQLPSLKELHISKFKGLVSIGPEFYGVGCCARNHQPFPSLEILTFYSMPAWEKWTHHEVDHESCRAFPCLRELHLEECPILLGDLPIYLPSLTNLTMRDCKQLATSFPSAPSIRTIDNCWKVELLEQINGCHQSLESLEIHNSCFSLKSFPLDFFPSLKSLVIWGCENLEYLTASVQLELLTSLHSLCIWRCPNFVAFPNGGLPTPNLTSLKVRYCNKLRSLPERMQSFLTSLKELLVWSCPEIESLPNGGLPTNLESFKIRDCDKLITHRLEWNMSCLTSLLHFSVEGKCEDVESFPDEGFLPPTLTQLEIRGLSNLKTLDSKGLQNLTSLKKLKILDCCKLESLGEEVTLPNSTVDLDIWKCPLLQEQWESNNRPKISEPGIWICDRHIKLDELQHL 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4620g00006 1189 Pfam Rx N-terminal domain 10 94 IPR041118 -
Gabi4620g00006 1189 Gene3D Ribonuclease Inhibitor 993 1163 IPR032675 -
Gabi4620g00006 1189 Coils Coil 68 88 - -
Gabi4620g00006 1189 FunFam Probable disease resistance protein At1g63360 405 491 - -
Gabi4620g00006 1189 PRINTS Disease resistance protein signature 259 273 - -
Gabi4620g00006 1189 PRINTS Disease resistance protein signature 877 893 - -
Gabi4620g00006 1189 PRINTS Disease resistance protein signature 356 370 - -
Gabi4620g00006 1189 PRINTS Disease resistance protein signature 186 201 - -
Gabi4620g00006 1189 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Gabi4620g00006 1189 Gene3D Ribonuclease Inhibitor 543 907 IPR032675 -
Gabi4620g00006 1189 Gene3D - 144 313 IPR027417 -
Gabi4620g00006 1189 Coils Coil 111 131 - -
Gabi4620g00006 1189 FunFam Probable disease resistance protein At1g61300 144 312 - -
Gabi4620g00006 1189 SUPERFAMILY L domain-like 915 1159 - -
Gabi4620g00006 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 419 IPR027417 -
Gabi4620g00006 1189 PANTHER DISEASE RESISTANCE PROTEIN RP 42 890 IPR044974 GO:0006952
Gabi4620g00006 1189 Gene3D - 19 125 - -
Gabi4620g00006 1189 Gene3D - 319 403 IPR042197 -
Gabi4620g00006 1189 Gene3D - 404 491 IPR036388 -
Gabi4620g00006 1189 SUPERFAMILY L domain-like 480 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4620g00006 Gabi-Chr4620 80549 84118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4620g00006 156 331 WRKY Transcription Factor Family AT4G12020 28.495 3.12e-07 53.1