Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00068 ATGAATAATTCTGTTTCAGATAACAGTTTTATTATTGAGAGTGATGAAGAAGATGAGAAGGATTTGAACAGAGGTCAAGATGATGGTCATGATTCTGATTCTTCCAATTACTCAAATGACAATCCTCCACAGAGAAAACCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATACAGTAGTGTACCATCACCAAATATTGGATTTCTGGGCACTCCCACATTGTCCAGATTAAGTAGTTCCTTTCTTTCATCATCTCTGACAAGGAGGCACACTCCTGAAATACTTCCTTCAGTGACAAAACCTCTGTTACAACCACCAGAAGAAGAGCATCAGAGACGTAGCTCCCATGCCTTGCTTCCTCCTCTTCCTTCTAGGAGGTCTTCTATGCTTAAGAAGGATTCCAAGGTTTCTCATGAAATTCCTTCTAGGCAATGCTCTTTTGGACAAGCTGTTCTTAATGGCATAAATGTACTTTGTGGTGTAGGAATCCTTTCTACCCCTTATGCTGCCAAACAAGGTGGATGGCTTGGGCTTTCGATCTTGTTCATTTTTGCAGTTATTTCATTTTATACTGGGATGCTCTTGCGTTCTTGCTTGGACAGTGAACCTGGCCTTGAGACATACCCTGACATTGGCCAAGCTGCATTTGGTACTACAGGACGTATTGCCATTTCAATAGTATTGTATGTGGAGTTATATGCTTGTTGCATTGAATATTTAATTTTGGAGGGCGACAACTTGTCTTCCTTATTTCCAAATGCATACTTAAGTTTTGGAGGAATTGAATTGAGTTCACATACTCTCTTTGCTGTGGTTGCCACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGTGGAGTTGTTGCATCAGTTTTGGTGGTTCTCTGCTTGTTTTGGATTGGCGTAGAGGATGTTGGCTTTCATAGCCAAGGGACAACACTCAATCTTGGAACTCTTCCTGTTGCTGTGGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATACATCCATGGCAAATCGAAACCAATTCCCTATAGTACTCTTAGTATGTTTTGGTATTTGTACATTGCTGTATGCCGGAGCTGCTGTTATGGGATACACAATGTTTGGAGAAGCTATTCTCTCTCAGTTCACTCTTAACCTGCCCCAAGATTTGGTGGCCAGCAAGATTGCTGTCTGGACTACGGTGGTTAATCCGTTTACCAAGTATGCGTTGACTATATCTCCTGTGGCAATGAGTCTTGAGGAGTTGATACCATCAAACCATGCCAAGTCTTACCTATATGCCATCTTCATCAGAACTGGGCTTGTAGTTTCTACCCTCATTATTGGTCTCTCAGTTCCATTTTTTGGTCTGGTGATGTCATTGATTGGATCATTACTTACAATGCTTGTTACTTTAATACTACCCTGTGTTTGTTTCCTAAGAATCCTTAGAGGCAGAGTCACACGATTACAGGCAACACTTTGCATTACAATTATCACGGTAGGTGTTGTATGTGCTGTTTTTGGAACATACTCAGCTCTCTCCGAGATTGTGAAGAGTTTGATTGGATGA 1626 0.4157 MNNSVSDNSFIIESDEEDEKDLNRGQDDGHDSDSSNYSNDNPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPTLSRLSSSFLSSSLTRRHTPEILPSVTKPLLQPPEEEHQRRSSHALLPPLPSRRSSMLKKDSKVSHEIPSRQCSFGQAVLNGINVLCGVGILSTPYAAKQGGWLGLSILFIFAVISFYTGMLLRSCLDSEPGLETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYLILEGDNLSSLFPNAYLSFGGIELSSHTLFAVVATLAVLPTVWLRDLSILSYISAGGVVASVLVVLCLFWIGVEDVGFHSQGTTLNLGTLPVAVGLYGYCYSGHAVFPNIYTSMANRNQFPIVLLVCFGICTLLYAGAAVMGYTMFGEAILSQFTLNLPQDLVASKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLYAIFIRTGLVVSTLIIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCFLRILRGRVTRLQATLCITIITVGVVCAVFGTYSALSEIVKSLIG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00068 541 Pfam Transmembrane amino acid transporter protein 151 531 IPR013057 -
Gabi4615g00068 541 FunFam Amino acid transporter AVT1A 150 538 - -
Gabi4615g00068 541 MobiDBLite consensus disorder prediction 1 52 - -
Gabi4615g00068 541 MobiDBLite consensus disorder prediction 100 138 - -
Gabi4615g00068 541 PANTHER OS05G0424000 PROTEIN-RELATED 161 525 - -
Gabi4615g00068 541 MobiDBLite consensus disorder prediction 17 34 - -
Gabi4615g00068 541 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00068 Gabi-Chr4615 715245 720646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00068 1 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.464 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00068 K15015 - gmx:100810530 926.006