Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00061 ATGGGTTCCACATCTGAGACAAGATGCTTCAAGTTGAGTTCATGCAATTCAAACACAGCAACCCCAGATATGCATGTATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAGTGGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAGGACGACTGCAAATGCACGCCAAAGATGGAAACTTGCAAAAGATGCTGCTAAGAAGGGTGCAACTGGACTGCAAACTCAACTATCACACACATTCTCCCGTAAGAAGGATGCAGCAAATCTGGAAAAAATTAACATTTTGAATCAAACAACTTCTGAAGCGGATGGTGAATTGTTGTTACATCCACAACCTATCACTTCAAACATGGTTGCAAGTTCATCTGTGGTGCCGAAGGTAAAGGGAAAAGAACCCAGTGGTCTAATGGAGATAATACATGAAATTGAAAATGACCCTGATATTAATGACAACCTTAATATAGAAATAGGAACTAGAGATAAAAGTGTTACAGGAAATATTTCAAAGGAAAAACAACCGCATACACATAGCCAAATTTTTAACTATGCATATACTCAACTTGAAAAAGAGAAGGCTCAGCAACAAGAAAACAAAAACCTTACATTCTCAGGAGTAATTAAAATGGCTGCAAACACTGAAAAAAGGAAAAGGCCTTTAGTTGAGATTGCTTTCAAAGATCTGACTCTTACATTGAAAGCTCAAAACAAACATATATTGAGATATGTTACTGGAAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGGGCTGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTTGGATGCTTGGTAACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCACTCCTTCAAGAAAATTATTGGCTTTGTACCACAAGATGATGTAGTTCATGGAAACCTGACGGTGGAAGAGAATCTCTGGTTCAATGCACAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTCATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCATTGGTTGGAACTGTAGAAAAGCGAGGTATTTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTTATGGAACCTTCACTTTTGATCTTGGATGAACCTACGTCTGGCTTGGACAGTGCATCATCTCAGCTCCTTCTAAGAGCACTGAGACGTGAAGCTCTTGAGGGAGTTAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGACTTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCATGGATCAGCCAAGCAAGTTGAGGAGTACTTTTCAGGCCTGGGGATCAATATCCCAGAGCGGATTAATCCTCCAGATTACTTAATTGACATTTTGGAAGGCATAGCAGTACCTGGTGGAAGCTCAGGATTCAGTTATAAAGAGCTTCCAGTTAGATGGATGCTTCATAATGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGAACAATTTGATATGTCCCAGAGTATAAATTCAGCTAATGAAATAGATCCCAATGGATCTGGTCATGTAGACAAAACCTTTGCTGGAGAATTATGGCAAGATGTGAGAAGCAATGTGGAGCTGCAGGGGCAGAAGATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTAACCGGAAAAATCCTGGTTTATTCAAGCAATATAAGTACTTTCTTAAACGGGTTGGGAAGCAGCGATTGCGGGAAGCTAGGATCCAAGCCATAGATTATCTGATTTTGTTACTAGCTGGAGCATGCTTAGGATTTCTTACCAAAGCAAGTGATCAAACGTTTGGTGCAGCTGGGTACACCTATACGGTGATTGCTGTATCTCTTCTGTGCAAAATTGCGGCCTTGAGATCATTTTCTCTAGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTCTCTAAAGACACAATTGATCATTTTAATACAGTGATCAAACCTGTGGTGTACCTCTCTATGTTCTATTTTTACACCAATCCAAGATCGACTTTTGCAGATAATTATGTTGTGCTGCTTTGTCTTGTATATTGTGTGACTGGCATAGCATACGCATTGGCCATATTTTTTGAACCTGGTGCAGCCCAGCTGTGGTCAGTACTTCTTCCTGTTGTTTTGACTCTCATTGCAACGCAATCACAAGATAGTAAAATTTTGAAGGAAATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTTGTTATTGCAAATGCTGAAAGGTATCAGGGAGTGTGGCTCATAAGTCGTTGTGGTTCACTTATGAAAAGTGGCTATAATCTTCATGATTGGAGTTTGTGCATATCCATCCTCATTCTTATGGGTGTAATTGCCCGGGCAATAGCATTTTTCTGTATGGTCACCTTCCAAAAGAAGTAA 2550 0.4012 MGSTSETRCFKLSSCNSNTATPDMHVYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARTTANARQRWKLAKDAAKKGATGLQTQLSHTFSRKKDAANLEKINILNQTTSEADGELLLHPQPITSNMVASSSVVPKVKGKEPSGLMEIIHEIENDPDINDNLNIEIGTRDKSVTGNISKEKQPHTHSQIFNYAYTQLEKEKAQQQENKNLTFSGVIKMAANTEKRKRPLVEIAFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCLVTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFNAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGLTVYHGSAKQVEEYFSGLGINIPERINPPDYLIDILEGIAVPGGSSGFSYKELPVRWMLHNGYPIPLDMRQNAEQFDMSQSINSANEIDPNGSGHVDKTFAGELWQDVRSNVELQGQKIRLNFFKSKDLSNRKNPGLFKQYKYFLKRVGKQRLREARIQAIDYLILLLAGACLGFLTKASDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFYTNPRSTFADNYVVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVLTLIATQSQDSKILKEIANLCYSKWALQAFVIANAERYQGVWLISRCGSLMKSGYNLHDWSLCISILILMGVIARAIAFFCMVTFQKK 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00061 849 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 242 484 IPR003439 GO:0005524
Gabi4615g00061 849 ProSitePatterns ABC transporters family signature. 383 397 IPR017871 GO:0005524|GO:0016887
Gabi4615g00061 849 Pfam ABC transporter 261 411 IPR003439 GO:0005524
Gabi4615g00061 849 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 205 836 - -
Gabi4615g00061 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 475 IPR027417 -
Gabi4615g00061 849 Pfam ABC-2 type transporter 440 849 IPR043926 GO:0140359
Gabi4615g00061 849 Gene3D - 240 477 IPR027417 -
Gabi4615g00061 849 SMART AAA_5 268 460 IPR003593 GO:0016887
Gabi4615g00061 849 CDD ABCG_EPDR 240 466 - -
Gabi4615g00061 849 FunFam ABC transporter G family member 24 236 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00061 Gabi-Chr4615 669892 681302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00061 239 461 Calmodulin-binding Proteins AT2G36910 26.033 2.25e-11 65.9