Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00055 ATGTGCAGGTCCAAAAAAAGCACAAGCGTCATAGAACCTAAGAACAGGAACATGAACAGGAATAAGCGATCAGCAACCTTAGCAACATCTTCATCTTCCACCAGCGATGTCCCCATCACTGAATCAAGAAGCTACGTCTTCGACAATACCAACAGAAAAGAATGGTCCAAATCTTCTTCCGTTTCGAGCCGCACCTCTCTCACTAGTCTCAGAGACACTCTCCCCGAAAACCCTCACATCTACCACTTCTCCGAGATCTCTGCCGCCACTTCTAATTTCTCCGACCACCGCCTCTCCTCCTCCTCCTGTCGCTGTTCAATTCGCAACCGCGAAGTCGTCGTTTTCAAGCGCAAGTTCCGCCGCCACATGGACATGCCGGAGCTCACCCACCGCCTCGCCCTCATCTGCCGGAGCCACCACAGCAGCCTCGTCAAACTCCTCGGAGCCTCCGTCTCCGGCAACTACATTTACCTCGTGTACGAGTTCATCCCCGGCGCTAGCCTCGCCGATTGCCTTCGTAATCGCCTGAACCCTAGCTTCACCGATCTCAACAATTGGATCTCGAGGATGCAGATCGCCGCCGATCTCGCTCACGGCCTCGATTACATTCACAATTCCTCGGGTTCCGATTCGGGTTTCGTCCACAACCACATCAAGAGCTCCAGCATCGTCGTCGCCGAGGAGAATTTGGGCGCCAAAATCTGCCACTTCGGCACGTCGGAGCTCTGCGGCGAGGCCGTCGAGGTTGCCGGGAACCCGTCCGGATCGGATTCCGGCGGGGGATTGAGGAGGTCCGGTAGCCGGACGGTGAAGTTCGAGGGGACGAGGGGGTACATGGCGCCGGAATTTCAGTTCACCGGCGTGGCGACGCAGAAGAGCGATGTGTACGCTTTCGGAGTTGTGGTTTTGGAGCTTCTGAGCGGGGAAGAAGCGTTGAAGTTCGAATTTGACGGCGACGGCGGTGACGGAGGATACAGGAGGGTGAGCGTGGTGGATACGGCGAGGGCCGCGGCGGAGGAATACGGAGGCGCGAGGAAGTGGGTGGATAAGAGGCTGAGGGATTCGTTTCCGGTGGAGGTGGCTGAGAGGATGATTCGGGTCGGGTTGGAGTGTGTTAGGGATGACCCGAATGAGAGGCCGGATATGGGTCGGATCTCGAATGAGGTGTCGAGGTTGTACTTGGAATCGAAGAAGTGGACAGAGAAAATGGGAACTAACATTGACTTTTCGGTCTCCTTGGCCCCCAGGTGA 1251 0.5643 MCRSKKSTSVIEPKNRNMNRNKRSATLATSSSSTSDVPITESRSYVFDNTNRKEWSKSSSVSSRTSLTSLRDTLPENPHIYHFSEISAATSNFSDHRLSSSSCRCSIRNREVVVFKRKFRRHMDMPELTHRLALICRSHHSSLVKLLGASVSGNYIYLVYEFIPGASLADCLRNRLNPSFTDLNNWISRMQIAADLAHGLDYIHNSSGSDSGFVHNHIKSSSIVVAEENLGAKICHFGTSELCGEAVEVAGNPSGSDSGGGLRRSGSRTVKFEGTRGYMAPEFQFTGVATQKSDVYAFGVVVLELLSGEEALKFEFDGDGGDGGYRRVSVVDTARAAAEEYGGARKWVDKRLRDSFPVEVAERMIRVGLECVRDDPNERPDMGRISNEVSRLYLESKKWTEKMGTNIDFSVSLAPR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00055 416 PANTHER OS09G0572100 PROTEIN 1 416 - -
Gabi4615g00055 416 MobiDBLite consensus disorder prediction 1 38 - -
Gabi4615g00055 416 Pfam Protein kinase domain 126 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4615g00055 416 Gene3D Transferase(Phosphotransferase) domain 1 164 411 - -
Gabi4615g00055 416 Gene3D Phosphorylase Kinase; domain 1 52 162 - -
Gabi4615g00055 416 ProSiteProfiles Protein kinase domain profile. 81 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4615g00055 416 MobiDBLite consensus disorder prediction 11 38 - -
Gabi4615g00055 416 SUPERFAMILY Protein kinase-like (PK-like) 111 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00055 Gabi-Chr4615 650171 652010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00055 76 406 Receptor kinase-like Gene Family AT1G51940 31.965 6.48e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi4615g00055 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00055 - - mtr:11414164 567