Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00052 ATGGAAATCAAAATTACATCAAGAGAAACAATCAAGCCATTCTTGCCTACATCAGATGAACACAAATTCTTCCAACTCTGTCTGTTTGATCAGCTTCAACTCATCACCTATTTGCCAACTCTTTTGTTTTACCCCAAAAAGGAAGGCCTCCAAGAACCTTATCATGTATGTGCTCAATTGAAAAAATCACTATCCGAGACACTAACCATTTTCTACCCTCTAGCTGGGAGAAGAAAATCACATACCTTTATCACTTGCAATGATGAAGGTGTTCTTTTCTTAGAAGCTAAGGTGAACCTTAACATGGTTGAGTTTCTCACACCACCTAAGCTAGAATTTCTAAACAAATTGCTTCCATGTGAACCTAATAAGGTGCACCTAAATGGAGAAGCGTTACCCCAAGTACTTGTACAAGTGAACATATTCAGTTGTGGTGGAATAGCTATAGGTACATGCAATCTCCACACTCTCCTTGATGGTTGCTCTGGCAGCCTCTTCTATTCTACTTGGGCTGCTATCTGTAGTGGCTCTAGACAGGAAAGACCACACCCTGATTTCTATTCTGCTTCATCTTTCTTTCCACCATTAAATCATTTGAGTTTGCATGACCATGTTGCTCATGAGGACTCACAAACACAAAAAAAGTGCACCACAAGAAGGTTTGTGTTTAATGCAGAATCCATCAACACTCTAAGAGCTGAAGCAAAAGATGATGATGGTGAAAGCTCAAAATCCCCTACACGATATGAAGCACTGGCTGCTTTCATTTGGAAACATATGACACTTGCATGCAAGACTGAATCTAGGGATAGCACAAGACCATCAGTGGCTATCCATATTGTGGACATGAGGAGGAGGATGGGTGAACCTTTCTCTAAATACACTATAGGCAACATTTTGTGGCCAGTAATGGCATTTTGTGAAACAGTGAATGCAAACACTGGTATTGGATATTTGGTTAGCATTGCCAGAGAGAAATTTGGAAAGCTCTCAAGGGAATTGTATTTGAGAGTGAAGAGTGATCCCAATATCCTAGGGAGCAATCAGTGTGTGAATCTGCCTCAAGGTATAGAAACAAGGAGTCCAATTCCTGTGGTATTGACAAGTTGGTGTGGTTTGAATTTCAATGAGCTAGATTTTGGTTGGGGGAAGCCTTTATGGGTTGGTGTTAGAGGAGGTGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATTGAAACAGATGCAGGCATGGAAGCTTGGCTAACCATGGAAATGCAACATATAGTTATCTTGGAAAAAGATATGGAGTTTCTCAGATTAGCTTTGCCTAATCCTAGTGTTTCAAATATATAG 1335 0.4037 MEIKITSRETIKPFLPTSDEHKFFQLCLFDQLQLITYLPTLLFYPKKEGLQEPYHVCAQLKKSLSETLTIFYPLAGRRKSHTFITCNDEGVLFLEAKVNLNMVEFLTPPKLEFLNKLLPCEPNKVHLNGEALPQVLVQVNIFSCGGIAIGTCNLHTLLDGCSGSLFYSTWAAICSGSRQERPHPDFYSASSFFPPLNHLSLHDHVAHEDSQTQKKCTTRRFVFNAESINTLRAEAKDDDGESSKSPTRYEALAAFIWKHMTLACKTESRDSTRPSVAIHIVDMRRRMGEPFSKYTIGNILWPVMAFCETVNANTGIGYLVSIAREKFGKLSRELYLRVKSDPNILGSNQCVNLPQGIETRSPIPVVLTSWCGLNFNELDFGWGKPLWVGVRGGDQETLPNVAVIIETDAGMEAWLTMEMQHIVILEKDMEFLRLALPNPSVSNI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00052 444 PANTHER F21J9.9 4 433 - -
Gabi4615g00052 444 Gene3D - 213 434 IPR023213 -
Gabi4615g00052 444 Gene3D - 1 205 IPR023213 -
Gabi4615g00052 444 Pfam Transferase family 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00052 Gabi-Chr4615 576762 578096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00052 60 427 Monolignol Biosynthesis Gene Families AT5G48930 24.548 4.56e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00052 - K13065 gmx:102668997 740.339