Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00036 ATGGCGAAGGACGTTGAGGTTGCTGAGCGTGGCTCCTTCTCTGGAAAGGACTACCATGACCCTCCTCCTGCACCTTTCATTGATGCTGAGGAGCTAACTAAGTGGTCCTTTTACAGGGCAGTCATTGCTGAGTTCGTTGCTACTTTGCTTTTCCTTTACATTACTGTGCTGACTGTTATCGGCTACAAGCACCAGAGTGATGTCAAAGATGGTGGTGATCTTTGTGGTGGGGTTGGCATTCTTGGCATTGCATGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGGATTTCAGGGGGCCACATTAACCCAGCAGTGACATTTGGGTTGTTCTTGGCTCGCAAGGTGTCTTTGATCCGAGCTATCATGTACATGGTGGCTCAGTGCTTGGGGGCTATCTGTGGAGTTGGGTTGGTCAAGGCCTTCCAAAAGTCTTTGTATACCAGGTATGGTGGTGGGGCCAATTCGCTCAATGATGGTTATAGCACAGGCGTTGGATTGGGTGCTGAGATTATTGGCACCTTTGTTTTGGTTTACACTGTCTTCTCTGCTACTGATCCCAAGAGGAATGCTAGAGATTCCCATGTGCCGGTTTTGGCTCCACTTCCCATTGGATTTGCGGTATTCATGGTCCACTTGGCCACCATCCCAGTCACTGGCACCGGCATTAACCCTGCTAGGAGTCTTGGAGCTGCTGTTATCTACAATCAAGATAAGCCCTGGGATGACCATGTGATGGATCTTTTGGGTAGGACCATTTATTGGGGCAGCCGTTGCAGCCTTCTACTACCAGTTCATCTTGAGAGGAGGTGCAGCTAA 831 0.4958 MAKDVEVAERGSFSGKDYHDPPPAPFIDAEELTKWSFYRAVIAEFVATLLFLYITVLTVIGYKHQSDVKDGGDLCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKSLYTRYGGGANSLNDGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQDKPWDDHVMDLLGRTIYWGSRCSLLLPVHLERRCS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00036 276 Gene3D Glycerol uptake facilitator protein. 24 264 IPR023271 -
Gabi4615g00036 276 NCBIfam MIP family channel protein 43 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 Pfam Major intrinsic protein 31 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 257 IPR034294 -
Gabi4615g00036 276 SUPERFAMILY Aquaporin-like 31 248 IPR023271 -
Gabi4615g00036 276 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Gabi4615g00036 276 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi4615g00036 276 FunFam Probable aquaporin PIP1-2 24 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00036 Gabi-Chr4615 387127 389940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00036 1 248 Major Intrinsic Protein MIP AT2G37170 87.097 1.32e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00036 K09872 - gmx:100817292 470.314