Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00021 ATGGGATATTCCAGATTCTATCTTGTTTTGCTTTTGTCCATTTGTGTGGGAAACTCATTAGCTTCCCCCATAGAAGATCAAGAGAGAGATAGGATTACTCAGCTACCAGGACAACCAAAGAATGTGGGATTTGCTCAGTACTCAGGCTATGTGACTGTGAATGAGGAGAGTGGGAGATCATTGTTTTACTGGTTGACTGAAGCACCAGTGAGTCGAGGACCTGAGTCAAGGCCACTAGTGTTATGGCTTAATGGTGGCCCTGGATGCTCTTCTATTGCTTATGGTGCATCTGAAGAAATGGGCCCTTTTCACATTAGGCCTGATGGGAAGTCACTTTATTTGAATCCTTATGCTTGGAACAATTTGGCAAATATACTATTCCTTGAATCTCCTGCTGGTGTTGGTTTTTCATATTCAAATAAAACGACGGAACTGTATACCTTTGGTGACAAGAGAACAGCTGAAGATGCATATACTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTTACCGGAAAAATAAGGGAATCGAGAATCCAGTCATTAATTTTAAGGGAGTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAGTACTGGTGGACACATGGTTTGGTTTCAGATTCCACATATAGGATGCTGAGAATTGCCTGTGATTTTGGGTCCTCCCAGCATCCATCAGTGCAATGCATGCAGGCTCTCAAAGTTGCAGTTGTGGAGCAGGGAAACATTGATCCATATAGCATTTATACACAGCCTTGTAAAAGTACAGCATCACTCAGACGCGGCTTGAGGGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAAGTTCAGAAAGCACTTCATGCCAACGTAACCGGAATTTCTTATCCATGGAAGACATGCAGTGACATTGTAGGGAACTATTGGACTGATTCTCCTCTTTCTATGCTTCCCATATATCGAGAACTTATTAATGCTAGCCTCCAGATATGGCTATACAGTGGAGACACGGATGCTGTGGTTCCAGTGACTGCCACTAGATATTCTATTGATGCGTTGAAGCTACCTACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGGCTCACATTTGTTACAGTAAGAGGAGCTGGACATGAGGTTCCACTTCATAGGCCTCGCCAAGCATTTATTCTTTTTAGGTCATTCTTGGAGAACAAGTCCATGCCATCTACAAGTTAG 1353 0.4183 MGYSRFYLVLLLSICVGNSLASPIEDQERDRITQLPGQPKNVGFAQYSGYVTVNEESGRSLFYWLTEAPVSRGPESRPLVLWLNGGPGCSSIAYGASEEMGPFHIRPDGKSLYLNPYAWNNLANILFLESPAGVGFSYSNKTTELYTFGDKRTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYRKNKGIENPVINFKGVMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVQCMQALKVAVVEQGNIDPYSIYTQPCKSTASLRRGLRAYDPCTERYSDLYFNRPEVQKALHANVTGISYPWKTCSDIVGNYWTDSPLSMLPIYRELINASLQIWLYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTFVTVRGAGHEVPLHRPRQAFILFRSFLENKSMPSTS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00021 450 Gene3D - 349 442 - -
Gabi4615g00021 450 ProSitePatterns Serine carboxypeptidases, histidine active site. 413 430 IPR033124 GO:0004185
Gabi4615g00021 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 430 IPR001563 GO:0004185|GO:0006508
Gabi4615g00021 450 FunFam Carboxypeptidase 299 446 - -
Gabi4615g00021 450 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Gabi4615g00021 450 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Gabi4615g00021 450 FunFam Carboxypeptidase 349 443 - -
Gabi4615g00021 450 SUPERFAMILY alpha/beta-Hydrolases 27 446 IPR029058 -
Gabi4615g00021 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Gabi4615g00021 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Gabi4615g00021 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi4615g00021 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Gabi4615g00021 450 FunFam Carboxypeptidase 26 288 - -
Gabi4615g00021 450 Gene3D - 302 338 - -
Gabi4615g00021 450 Pfam Serine carboxypeptidase 36 443 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00021 Gabi-Chr4615 153951 158677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00021 312 446 Calmodulin-binding Proteins AT2G22960 27.941 8.76e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00021 K16297 - gmx:100805722 868.611