Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00020 ATGGGATATTCCAGATTCTATCTTGTTTTGCTTTTGTCCATTTGTGTGGGAAACTCATTAGCTTCCCCCATAGAAGATCAAGAGAGAGATAGGATTACTCAGCTACCAGGACAACCAAAGAATGTGGGATTTGCTCAGTACTCAGGCTATGTGACTGTGAATGAGGAGAGTGGGAGATCATTGTTTTACTGGTTGACTGAAGCACCAGTGAGTCGAGGACCTGAGTCAAGGCCACTAGTGTTATGGCTTAATGGTGGCCCTGGATGCTCTTCTATTGCTTATGGTGCATCTGAAGAAATGGGCCCTTTTCACATTAGGCCTGATGGGAAGTCACTTTATTTGAATCCTTATGCTTGGAACAATTTGGCAAATATACTATTCCTTGAATCTCCTGCTGGTGTTGGTTTTTCATATTCAAATAAAACGACGGAACTGTATACCTTTGGTGACAAGAGAACAGCTGAAGATGCATATACTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTTACCGGAAAAATAAGGGAATCGAGAATCCAGTCATTAATTTTAAGGGAGTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAGTACTGGTGGACACATGGTTTGGTTTCAGATTCCACATATAGGATGCTGAGAATTGCCTGTGATTTTGGGTCCTCCCAGCATCCATCAGTGCAATGCATGCAGGCTCTCAAAGTTGCAGTTGTGGAGCAGGGAAACATTGATCCATATAGCATTTATACACAGCCTTGTAAAAGTACAGCATCACTCAGACGCGGCTTGAGGGGTCGCTATTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAAGTTCAGAAAGCACTTCATGCCAACGTAACCGGAATTTCTTATCCATGGAAGACATGCAGTGACATTGTAGGGAACTATTGGACTGATTCTCCTCTTTCTATGCTTCCCATATATCGAGAACTTATTAATGCTAGCCTCCAGATATGGCTATACAGTGGAGACACGGATGCTGTGGTTCCAGTGACTGCCACTAGATATTCTATTGATGCGTTGAAGCTACCTACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGGCTCACATTTGTTACAGTAAGAGGAGCTGGACATGAGGTTCCACTTCATAGGCCTCGCCAAGCATTTATTCTTTTTAGGTCATTCTTGGAGAACAAGTCCATGCCATCTACAAGTTAG 1368 0.4196 MGYSRFYLVLLLSICVGNSLASPIEDQERDRITQLPGQPKNVGFAQYSGYVTVNEESGRSLFYWLTEAPVSRGPESRPLVLWLNGGPGCSSIAYGASEEMGPFHIRPDGKSLYLNPYAWNNLANILFLESPAGVGFSYSNKTTELYTFGDKRTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYRKNKGIENPVINFKGVMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVQCMQALKVAVVEQGNIDPYSIYTQPCKSTASLRRGLRGRYSRAYDPCTERYSDLYFNRPEVQKALHANVTGISYPWKTCSDIVGNYWTDSPLSMLPIYRELINASLQIWLYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTFVTVRGAGHEVPLHRPRQAFILFRSFLENKSMPSTS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00020 455 ProSitePatterns Serine carboxypeptidases, histidine active site. 418 435 IPR033124 GO:0004185
Gabi4615g00020 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 418 431 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 Gene3D - 307 343 - -
Gabi4615g00020 455 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Gabi4615g00020 455 SUPERFAMILY alpha/beta-Hydrolases 27 451 IPR029058 -
Gabi4615g00020 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 435 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 FunFam Carboxypeptidase 26 288 - -
Gabi4615g00020 455 Pfam Serine carboxypeptidase 36 448 IPR001563 GO:0004185|GO:0006508
Gabi4615g00020 455 FunFam Carboxypeptidase 354 448 - -
Gabi4615g00020 455 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Gabi4615g00020 455 Gene3D - 354 447 - -
Gabi4615g00020 455 FunFam Carboxypeptidase 304 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00020 Gabi-Chr4615 153951 158677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00020 317 451 Calmodulin-binding Proteins AT2G22960 27.941 9.88e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00020 K16297 - gmx:100805722 872.463