Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00019 ATGGGATATTCCAGATTCTATCTTGTTTTGCTTTTGTCCATTTGTGTGGGAAACTCATTAGCTTCCCCCATAGAAGATCAAGAGAGAGATAGGATTACTCAGCTACCAGGACAACCAAAGAATGTGGGATTTGCTCAGTACTCAGGCTATGTGACTGTGAATGAGGAGAGTGGGAGATCATTGTTTTACTGGTTGACTGAAGCACCAGTGAGTCGAGGACCTGAGTCAAGGCCACTAGTGTTATGGCTTAATGGTGGCCCTGGATGCTCTTCTATTGCTTATGGTGCATCTGAAGAAATGGGCCCTTTTCACATTAGGCCTGATGGGAAGTCACTTTATTTGAATCCTTATGCTTGGAACAATTTGGCAAATATACTATTCCTTGAATCTCCTGCTGGTGTTGGTTTTTCATATTCAAATAAAACGACGGAACTGTATACCTTTGGTGACAAGAGAACAGCTGAAGATGCATATACTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTTACCGGAAAAATAAGGGAATCGAGAATCCAGTCATTAATTTTAAGGGAGTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAGTACTGGTGGACACATGGTTTGGTTTCAGATTCCACATATAGGATGCTGAGAATTGCCTGTGATTTTGGGTCCTCCCAGCATCCATCAGTGCAATGCATGCAGGCTCTCAAAGTTGCAGTTGTGGAGCAGGGAAACATTGATCCATATAGCATTTATACACAGCCTTGTAAAAGTACAGCATCACTCAGACGCGGCTTGAGGGGTCGCTATCCATGGAAGTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAAGTTCAGAAAGCACTTCATGCCAACGTAACCGGAATTTCTTATCCATGGAAGACATGCAGTGGAGACACGGATGCTGTGGTTCCAGTGACTGCCACTAGATATTCTATTGATGCGTTGAAGCTACCTACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGGCTCACATTTGTTACAGTAAGAGGAGCTGGACATGAGGTTCCACTTCATAGGCCTCGCCAAGCATTTATTCTTTTTAGGTCATTCTTGGAGAACAAGTCCATGCCATCTACAAGTTAG 1281 0.4223 MGYSRFYLVLLLSICVGNSLASPIEDQERDRITQLPGQPKNVGFAQYSGYVTVNEESGRSLFYWLTEAPVSRGPESRPLVLWLNGGPGCSSIAYGASEEMGPFHIRPDGKSLYLNPYAWNNLANILFLESPAGVGFSYSNKTTELYTFGDKRTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYRKNKGIENPVINFKGVMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVQCMQALKVAVVEQGNIDPYSIYTQPCKSTASLRRGLRGRYPWKSRAYDPCTERYSDLYFNRPEVQKALHANVTGISYPWKTCSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTFVTVRGAGHEVPLHRPRQAFILFRSFLENKSMPSTS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00019 426 Gene3D - 344 422 - -
Gabi4615g00019 426 Pfam Serine carboxypeptidase 36 343 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Gabi4615g00019 426 Gene3D - 310 343 - -
Gabi4615g00019 426 FunFam Carboxypeptidase 325 419 - -
Gabi4615g00019 426 SUPERFAMILY alpha/beta-Hydrolases 27 422 IPR029058 -
Gabi4615g00019 426 ProSitePatterns Serine carboxypeptidases, histidine active site. 389 406 IPR033124 GO:0004185
Gabi4615g00019 426 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Gabi4615g00019 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 389 402 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 406 IPR001563 GO:0004185|GO:0006508
Gabi4615g00019 426 FunFam Carboxypeptidase 26 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00019 Gabi-Chr4615 153951 158677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00019 343 422 Calmodulin-binding Proteins AT2G22960 33.333 1.42e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00019 K16297 - gmx:100812000 816.609