Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00017 ATGCTGGAGGAAGATAGTCGGCCATCAATCTCACGGGGGGATGGAAAATATAGCAGGAGCAGTAGGGAGAATAGAGGACCCTTTGGCCCAAGAGATTGGAGAGGACATTCATGGGAAACCACCAATGGCTCTCTAAATGTGTCCAGGAGGCCACCAGATGTGAATAATGACCAGAGGTCAGTTGATGATGACCTAACTTATTCCTCTCATCCACATACTGATCTCGTAAACAGTTGGGATCAGCACCATTTGAAAGACCAGCATGATAGGATGGGTGGTGTCAATGGGTTGGGAACAGGTCCGAGATGTGATAGAGAGAATTCACTGGGTTCAATTGACTGGAAGCCACTCAAATGGACCCGTTCTGGAAGCCTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGGGCAGATTCCTATGAAGCGAAGACTGAGTTGCAACCCAAAAATGCAACTGCTATTGAGTCGCATTCTGGGGAAGTTGCTGCATGTGTGACATCTTCTGCACCATCTGAAGATACAACTTCTAGAAAGAAGCCTAGGCTAAACTGGGGAGAGGGTCTTGCAAAATATGAGAAGAAAAAAGTTGAGGGGCCTGATGTAAGTGCAAACAAAGATTGCCCTGTCCTGTCTACTAGTAACATGGAACCTTGTAACTTCCTCAGTCCCAGCTTAGTAGATAATAGCCCAAAAGTTACAGGATTTTCGGGCTGTGCATCTCCCGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTATTTGGAAAGACTGCCAATGTGGACAATGATGTTAGTAATTTGACCACTTCACCTGTTCCTGGGTCCCAAAATCATCTACCGGAAGTTTCTTTTAATTTAGAGAAATTGGATGATGACTCCTTGAATAATTTGGGTTCTTCAATTGTTGAGTTAGTACAATCTGATGATCCAAGTTCTGTGGATTCTGGTCTAGTGAGATCCAATGCAATGAATAAGTTGTTGATATGGAAAGCTGACATTTCAAAGGTAGTGGAGATGACTGAATCTGAAATTGATTCACTTGAAAATGAACTGAAGTCACTAAAACATGAATCTGTGGATGGATGTACGCGTCCAGCAGAATTGGGCTCACAGCTGGTAGATAAGAATGGAAAATCTTGTGAAGAACATGTTGGAGTCTCTGATAAGGTCACTTGGCCAGTGCCATTGAAAATTGTTACTTCTGATGAACCCGATGTGGAGAAGATGCCTCTTTCAACAAATTTACATAGTACTCATGAAAATGGCAATGAAGAGGATATTGATAGTCCAGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTGATTAAAGCAGTTTCTTCAATTGATACGAACCTCTCTGGGGACTTGGATGCTGTTCAGTCTACAGCCATGAAATGCTTAGTTCCCTGTACTTCTAGGAAAGATGCCAGTGCATCTGCTTGTGGTGATGGCAATATGTCTATGGATGTAAAGGATAGCATGGATGCCACCTCTGGTGCAAGCTTATGTTCTGGCATGGAGGATGTTTTATACAATACAATTATTTCTTCCAATAAAGAATCTGTCAGTAAAGCAGATGGAGTATTTGCTAAGTTATTACCCAAAGGATGCTGTGAGATTGGTAATATGGGAGCTGGCAGGAACTCATACTCCCATACATTGATTATGGAAAAATTTGCAGAGAAAAAGCAGTTTGCAAGATTTAAGGAAAGAGTTATCACACTTAAGTTCAAAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATAAAGAAATGCCGCCCAAAATCTCACAAGAAGAGTGAAATAAGTGTGCGAACTACCTGTAATGTTAATCCCAAGAATCGATCTTCCATTCGATCACGTTTTGCCTTCCCTGCAGGAAATCATCTAAGCTTGGTGCCAACTTCTGATATAATTAATTTTACAAGCAAACTGCTTTCAGAACCCCAAGTTAAAGTTCAGAGGAATACCCTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATTTCAAAGTTCTTATCTAGTAATGGGTTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCAGATGAGAGAGAAATTTTCTTCGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGATTGTGTTGAATTCTACTACAAAAATCACAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTAGGGAAGTCATTTTCAGCTAAAACTGGCTTGGTGGCATCTGGTAAAAAATGGAATCGTGAAGTGGATGCTGCTTCGCTTGAGATTTTAAGTGCAGCTTCAGTGATGGCAGATGGCATTGCATGTAATAGAAAATTGCGTGCAGGAAGTTCCCTTTGGAGGGGATATGGTAATGTAAAAACATCAAGGGGCGAGTATAGCATCGTAGAGAGATCAAGCAGTTTTGACATTTTTGGGGATGAAAGAGACACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGAAGGTAACAGGGATAGAAAGCTCTTGAAAGAGAACCCTTTATGCAAACAACCCTTGATGCTTGATGTTTCTCAGGATGTTGATGATGACACTTGTTCAGATGAGAGCTGTGGCGAAATGGATCCAACTGATTGGACAGATGAGGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGCAAGGATTTTGCAAAGATAGCAAGGTGTGTAGGAACAAGGTCCCAAGAACAGTGCAAAATTTTCTTCAGCAAGGCTCGAAAATGCCTTGGATTGGATCTCATGCGCCCCATACCTGAAAATGTTGGATCTCCAGTGAATGATGATGCAAATGATGGCAGGAGTGACACAGATGATGCTTGTGTTGTTGATACTGATAAGTCTGGCACTAAAACAGATGAGGACCTTCCTTCCTATGTCATGAACACATACCATGATGAATCTACTCCCGGTCAAGTTCAGAAGCTTTCAGCTGAATTGAACAAATCAAAGGAAATTAATGGGACAAAAACAGATCTTGAAGATGTAAATGTGGTTTCTGATGCATGTACAATTAAGGACGAACCTAAACTGGGCTCTGATGGTTGTAAAGTTGGCTTGTGCAGTTCTGAGAAGCTTGGTTCAACCAGTGGACAAGCAGCTATATTTATGTCAGATAGTACAGAAGTTGGAAAAGATAATGCAAATAAATTGGGAGGTGCAGTTACAGATTTGATTTCTGCTTTGGAGATAAGTGAACCATGCAAGAGTAATTCTGTGGCTGAGTATAGATTGGTTTCTGAGGTTTCTTCTGGGGGTATTGTAAATGGATTGGAAAGGCAAAGAGTTTCTTCACCTCAATGTCTTGATGGAAGTGATAAAAGTAAAGTTGACCCAGATGTTGTAGTTAAATTGAAAAGCTCTGGGCAAGATTCAATCACTACAGTAAATGCGTCACTCTCTTCTTTGGGCAATTCTTGTTCAGTATCGAGTTTTAATACTGAAAATAAGAATGTGTCCCTTGGAAAGCCTCATATGTCAGCATTGTCTATGGAGGATCTTCATCCAACTGCAAATTCATTGTTGCAAAATACTGCTGCTACAGATTTTCATAGTGAGAAAAGTGCTAGCCAAGATCGACTGTCTTCTACTTGTGATATTCAGGGAAGTAGAGATATGCTTTGTCACAAGTCCATCAGCAGTGGTGACCATCAGCTTCCTATTCCTGGGAATTCATCAGACCGTGTTGAGGCAGTTAGCATCCTCCAGGGCTATCCTTTGCAAGTATCCATTAAGAAAGAAGTGAATGGGGACATGAATTGCAGCAGTTCAGCAACTGAGTTGCCTCTTCTGTCTCAAAGGATTGAAAAATTCGATGATCATTTCAAATCATTACGGTATTTGTCAGATTCTGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGTAAGATACTAACCAATCCTTCATCTGCTCAGAAACCTAATTTGACTGCCAAGGGAAGTGAAGAAAATGGTAACCATCATCCCAAGTTAAGCAGCAAGTCTTCTAGTCTGAAATTTAATGGCCATCATAATGCTGATGGAAATTTGAAAATTTTGAAGTTCGACCGTAATGACTGTAATGATTATCTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACAGAATTCAGACTAGTCTCTCATCCTTGCCCGATTCTGCCATCTTACTAGCTAAATATCCTGCTGCCTTTAGTAATTATCCTCCATCTTCTGCCAAATTGGAGCAACAGACATTGCAAGCATTTGCCAGGAATAATGATCTGCACCTGAATGGTGCAGCTGCTTTTACAACTAGAGACATCAATGGCAGCAATGCGTTGATTGATTATCAGATGTTTAGAAGTCGGGACGGTCCAAAAGTGCAGCCATTTATGGTAGATGTCAAGCACTGCCAAGATGTTTTTTCAGAGATGCAGAAAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAACAGCAGGGGATGGGAATGATGGGAATGAATGGTGTTGGAAGAGCGGGGATTCTTATGGGAGGATCATGCAGTGGAGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGAGAGGTATGGTGGTCAGACCGGGAGTATCAAAAGAGAAGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG 4857 0.4149 MLEEDSRPSISRGDGKYSRSSRENRGPFGPRDWRGHSWETTNGSLNVSRRPPDVNNDQRSVDDDLTYSSHPHTDLVNSWDQHHLKDQHDRMGGVNGLGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSYEAKTELQPKNATAIESHSGEVAACVTSSAPSEDTTSRKKPRLNWGEGLAKYEKKKVEGPDVSANKDCPVLSTSNMEPCNFLSPSLVDNSPKVTGFSGCASPATPSSVACSSSPGVDDKLFGKTANVDNDVSNLTTSPVPGSQNHLPEVSFNLEKLDDDSLNNLGSSIVELVQSDDPSSVDSGLVRSNAMNKLLIWKADISKVVEMTESEIDSLENELKSLKHESVDGCTRPAELGSQLVDKNGKSCEEHVGVSDKVTWPVPLKIVTSDEPDVEKMPLSTNLHSTHENGNEEDIDSPGTATSKFVEPLPLIKAVSSIDTNLSGDLDAVQSTAMKCLVPCTSRKDASASACGDGNMSMDVKDSMDATSGASLCSGMEDVLYNTIISSNKESVSKADGVFAKLLPKGCCEIGNMGAGRNSYSHTLIMEKFAEKKQFARFKERVITLKFKALHHLWKEDMRLLSIKKCRPKSHKKSEISVRTTCNVNPKNRSSIRSRFAFPAGNHLSLVPTSDIINFTSKLLSEPQVKVQRNTLKMPALILDEKEKMISKFLSSNGLVEDPLAIEKERAMINPWTSDEREIFFEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTGLVASGKKWNREVDAASLEILSAASVMADGIACNRKLRAGSSLWRGYGNVKTSRGEYSIVERSSSFDIFGDERDTAAAADVLAGICGSLSSEAMSSCITSSIDPVEGNRDRKLLKENPLCKQPLMLDVSQDVDDDTCSDESCGEMDPTDWTDEEKAAFLQAVSSFGKDFAKIARCVGTRSQEQCKIFFSKARKCLGLDLMRPIPENVGSPVNDDANDGRSDTDDACVVDTDKSGTKTDEDLPSYVMNTYHDESTPGQVQKLSAELNKSKEINGTKTDLEDVNVVSDACTIKDEPKLGSDGCKVGLCSSEKLGSTSGQAAIFMSDSTEVGKDNANKLGGAVTDLISALEISEPCKSNSVAEYRLVSEVSSGGIVNGLERQRVSSPQCLDGSDKSKVDPDVVVKLKSSGQDSITTVNASLSSLGNSCSVSSFNTENKNVSLGKPHMSALSMEDLHPTANSLLQNTAATDFHSEKSASQDRLSSTCDIQGSRDMLCHKSISSGDHQLPIPGNSSDRVEAVSILQGYPLQVSIKKEVNGDMNCSSSATELPLLSQRIEKFDDHFKSLRYLSDSEKTSRNGDVKLFGKILTNPSSAQKPNLTAKGSEENGNHHPKLSSKSSSLKFNGHHNADGNLKILKFDRNDCNDYLGLENVPMRSYGYWDGNRIQTSLSSLPDSAILLAKYPAAFSNYPPSSAKLEQQTLQAFARNNDLHLNGAAAFTTRDINGSNALIDYQMFRSRDGPKVQPFMVDVKHCQDVFSEMQKRNGFEAISSLQQQGMGMMGMNGVGRAGILMGGSCSGVSDPVAAIKMHYSNSERYGGQTGSIKREDESWGGKGDLGR 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00017 1618 ProSiteProfiles SANT domain profile. 712 763 IPR017884 -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 122 149 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 122 144 - -
Gabi4615g00017 1618 SUPERFAMILY Homeodomain-like 930 979 IPR009057 -
Gabi4615g00017 1618 Coils Coil 343 370 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 1596 1618 - -
Gabi4615g00017 1618 SUPERFAMILY Homeodomain-like 700 760 IPR009057 -
Gabi4615g00017 1618 CDD SANT 933 971 IPR001005 -
Gabi4615g00017 1618 Pfam Myb-like DNA-binding domain 932 972 IPR001005 -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 1372 1403 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 999 1021 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 1 32 - -
Gabi4615g00017 1618 Gene3D - 693 765 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 1 110 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 989 1025 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 1600 1618 - -
Gabi4615g00017 1618 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 1615 - -
Gabi4615g00017 1618 Gene3D - 895 984 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 55 69 - -
Gabi4615g00017 1618 ProSiteProfiles SANT domain profile. 931 979 IPR017884 -
Gabi4615g00017 1618 SMART sant 713 761 IPR001005 -
Gabi4615g00017 1618 SMART sant 929 977 IPR001005 -
Gabi4615g00017 1618 ProSiteProfiles Myb-like domain profile. 933 975 IPR001005 -
Gabi4615g00017 1618 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 933 982 IPR017930 -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 164 188 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 37 54 - -
Gabi4615g00017 1618 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00017 Gabi-Chr4615 125544 134609 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4615g00017 Myb_DNA-binding 2.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00017 - - gmx:100810588 2362.8