Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00016 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCACTAGGATCTGTGGCGAGATGGAGAGATTCGTCCCACCACCGAGACTTCAATCGGTGGGGATCCCCCGAGTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAGGTTGGCACCTGTTTTCCGAAGAATCTGGTCACGGGTATGCGATTTCTCGGACCGGTGACAAGATGCTGGAGGAAGATAGTCGGCCATCAATCTCACGGGGGGATGGAAAATATAGCAGGAGCAGTAGGGAGAATAGAGGACCCTTTGGCCCAAGAGATTGGAGAGGACATTCATGGGAAACCACCAATGGCTCTCTAAATGTGTCCAGGAGGCCACCAGATGTGAATAATGACCAGAGGTCAGTTGATGATGACCTAACTTATTCCTCTCATCCACATACTGATCTCGTAAACAGTTGGGATCAGCACCATTTGAAAGACCAGCATGATAGGATGGGTGGTGTCAATGGGTTGGGAACAGGTCCGAGATGTGATAGAGAGAATTCACTGGGTTCAATTGACTGGAAGCCACTCAAATGGACCCGTTCTGGAAGCCTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGGGCAGATTCCTATGAAGCGAAGACTGAGTTGCAACCCAAAAATGCAACTGCTATTGAGTCGCATTCTGGGGAAGTTGCTGCATGTGTGACATCTTCTGCACCATCTGAAGATACAACTTCTAGAAAGAAGCCTAGGCTAAACTGGGGAGAGGGTCTTGCAAAATATGAGAAGAAAAAAGTTGAGGGGCCTGATGTAAGTGCAAACAAAGATTGCCCTGTCCTGTCTACTAGTAACATGGAACCTTGTAACTTCCTCAGTCCCAGCTTAGTAGATAATAGCCCAAAAGTTACAGGATTTTCGGGCTGTGCATCTCCCGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTATTTGGAAAGACTGCCAATGTGGACAATGATGTTAGTAATTTGACCACTTCACCTGTTCCTGGGTCCCAAAATCATCTACCGGAAGTTTCTTTTAATTTAGAGAAATTGGATGATGACTCCTTGAATAATTTGGGTTCTTCAATTGTTGAGTTAGTACAATCTGATGATCCAAGTTCTGTGGATTCTGGTCTAGTGAGATCCAATGCAATGAATAAGTTGTTGATATGGAAAGCTGACATTTCAAAGGTAGTGGAGATGACTGAATCTGAAATTGATTCACTTGAAAATGAACTGAAGTCACTAAAACATGAATCTGTGGATGGATGTACGCGTCCAGCAGAATTGGGCTCACAGCTGGTAGATAAGAATGGAAAATCTTGTGAAGAACATGTTGGAGTCTCTGATAAGGTCACTTGGCCAGTGCCATTGAAAATTGTTACTTCTGATGAACCCGATGTGGAGAAGATGCCTCTTTCAACAAATTTACATAGTACTCATGAAAATGGCAATGAAGAGGATATTGATAGTCCAGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTGATTAAAGCAGTTTCTTCAATTGATACGAACCTCTCTGGGGACTTGGATGCTGTTCAGTCTACAGCCATGAAATGCTTAGTTCCCTGTACTTCTAGGAAAGATGCCAGTGCATCTGCTTGTGGTGATGGCAATATGTCTATGGATGTAAAGGATAGCATGGATGCCACCTCTGGTGCAAGCTTATGTTCTGGCATGGAGGATGTTTTATACAATACAATTATTTCTTCCAATAAAGAATCTGTCAGTAAAGCAGATGGAGTATTTGCTAAGTTATTACCCAAAGGATGCTGTGAGATTGGTAATATGGGAGCTGGCAGGAACTCATACTCCCATACATTGATTATGGAAAAATTTGCAGAGAAAAAGCAGTTTGCAAGATTTAAGGAAAGAGTTATCACACTTAAGTTCAAAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATAAAGAAATGCCGCCCAAAATCTCACAAGAAGAGTGAAATAAGTGTGCGAACTACCTGTAATGTTAATCCCAAGAATCGATCTTCCATTCGATCACGTTTTGCCTTCCCTGCAGGAAATCATCTAAGCTTGGTGCCAACTTCTGATATAATTAATTTTACAAGCAAACTGCTTTCAGAACCCCAAGTTAAAGTTCAGAGGAATACCCTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATTTCAAAGTTCTTATCTAGTAATGGGTTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCAGATGAGAGAGAAATTTTCTTCGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGATTGTGTTGAATTCTACTACAAAAATCACAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTAGGGAAGTCATTTTCAGCTAAAACTGGCTTGGTGGCATCTGGTAAAAAATGGAATCGTGAAGTGGATGCTGCTTCGCTTGAGATTTTAAGTGCAGCTTCAGTGATGGCAGATGGCATTGCATGTAATAGAAAATTGCGTGCAGGAAGTTCCCTTTGGAGGGGATATGGTAATGTAAAAACATCAAGGGGCGAGTATAGCATCGTAGAGAGATCAAGCAGTTTTGACATTTTTGGGGATGAAAGAGACACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGAAGGTAACAGGGATAGAAAGCTCTTGAAAGAGAACCCTTTATGCAAACAACCCTTGATGCTTGATGTTTCTCAGGATGTTGATGATGACACTTGTTCAGATGAGAGCTGTGGCGAAATGGATCCAACTGATTGGACAGATGAGGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGCAAGGATTTTGCAAAGATAGCAAGGTGTGTAGGAACAAGGTCCCAAGAACAGTGCAAAATTTTCTTCAGCAAGGCTCGAAAATGCCTTGGATTGGATCTCATGCGCCCCATACCTGAAAATGTTGGATCTCCAGTGAATGATGATGCAAATGATGGCAGGAGTGACACAGATGATGCTTGTGTTGTTGATACTGATAAGTCTGGCACTAAAACAGATGAGGACCTTCCTTCCTATGTCATGAACACATACCATGATGAATCTACTCCCGGTCAAGTTCAGAAGCTTTCAGCTGAATTGAACAAATCAAAGGAAATTAATGGGACAAAAACAGATCTTGAAGATGTAAATGTGGTTTCTGATGCATGTACAATTAAGGACGAACCTAAACTGGGCTCTGATGGTTGTAAAGTTGGCTTGTGCAGTTCTGAGAAGCTTGGTTCAACCAGTGGACAAGCAGCTATATTTATGTCAGATAGTACAGAAGTTGGAAAAGATAATGCAAATAAATTGGGAGGTGCAGTTACAGATTTGATTTCTGCTTTGGAGATAAGTGAACCATGCAAGAGTAATTCTGTGGCTGAGTATAGATTGGTTTCTGAGGTTTCTTCTGGGGGTATTGTAAATGGATTGGAAAGGCAAAGAGTTTCTTCACCTCAATGTCTTGATGGAAGTGATAAAAGTAAAGTTGACCCAGATGTTGTAGTTAAATTGAAAAGCTCTGGGCAAGATTCAATCACTACAGTAAATGCGTCACTCTCTTCTTTGGGCAATTCTTGTTCAGTATCGAGTTTTAATACTGAAAATAAGAATGTGTCCCTTGGAAAGCCTCATATGTCAGCATTGTCTATGGAGGATCTTCATCCAACTGCAAATTCATTGTTGCAAAATACTGCTGCTACAGATTTTCATAGTGAGAAAAGTGCTAGCCAAGATCGACTGTCTTCTACTTGTGATATTCAGGGAAGTAGAGATATGCTTTGTCACAAGTCCATCAGCAGTGGTGACCATCAGCTTCCTATTCCTGGGAATTCATCAGACCGTGTTGAGGCAGTTAGCATCCTCCAGGGCTATCCTTTGCAAGTATCCATTAAGAAAGAAGTGAATGGGGACATGAATTGCAGCAGTTCAGCAACTGAGTTGCCTCTTCTGTCTCAAAGGATTGAAAAATTCGATGATCATTTCAAATCATTACGGTATTTGTCAGATTCTGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGTAAGATACTAACCAATCCTTCATCTGCTCAGAAACCTAATTTGACTGCCAAGGGAAGTGAAGAAAATGGTAACCATCATCCCAAGTTAAGCAGCAAGTCTTCTAGTCTGAAATTTAATGGCCATCATAATGCTGATGGAAATTTGAAAATTTTGAAGTTCGACCGTAATGACTGTAATGATTATCTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACAGAATTCAGACTAGTCTCTCATCCTTGCCCGATTCTGCCATCTTACTAGCTAAATATCCTGCTGCCTTTAGTAATTATCCTCCATCTTCTGCCAAATTGGAGCAACAGACATTGCAAGCATTTGCCAGGAATAATGATCTGCACCTGAATGGTGCAGCTGCTTTTACAACTAGAGACATCAATGGCAGCAATGCGTTGATTGATTATCAGATGTTTAGAAGTCGGGACGGTCCAAAAGTGCAGCCATTTATGGTAGATGTCAAGCACTGCCAAGATGTTTTTTCAGAGATGCAGAAAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAACAGCAGGGGATGGGAATGATGGGAATGAATGGTGTTGGAAGAGCGGGGATTCTTATGGGAGGATCATGCAGTGGAGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGAGAGGTATGGTGGTCAGACCGGGAGTATCAAAAGAGAAGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG 5094 0.4215 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSPEFRRPPGHGKQGGWHLFSEESGHGYAISRTGDKMLEEDSRPSISRGDGKYSRSSRENRGPFGPRDWRGHSWETTNGSLNVSRRPPDVNNDQRSVDDDLTYSSHPHTDLVNSWDQHHLKDQHDRMGGVNGLGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSYEAKTELQPKNATAIESHSGEVAACVTSSAPSEDTTSRKKPRLNWGEGLAKYEKKKVEGPDVSANKDCPVLSTSNMEPCNFLSPSLVDNSPKVTGFSGCASPATPSSVACSSSPGVDDKLFGKTANVDNDVSNLTTSPVPGSQNHLPEVSFNLEKLDDDSLNNLGSSIVELVQSDDPSSVDSGLVRSNAMNKLLIWKADISKVVEMTESEIDSLENELKSLKHESVDGCTRPAELGSQLVDKNGKSCEEHVGVSDKVTWPVPLKIVTSDEPDVEKMPLSTNLHSTHENGNEEDIDSPGTATSKFVEPLPLIKAVSSIDTNLSGDLDAVQSTAMKCLVPCTSRKDASASACGDGNMSMDVKDSMDATSGASLCSGMEDVLYNTIISSNKESVSKADGVFAKLLPKGCCEIGNMGAGRNSYSHTLIMEKFAEKKQFARFKERVITLKFKALHHLWKEDMRLLSIKKCRPKSHKKSEISVRTTCNVNPKNRSSIRSRFAFPAGNHLSLVPTSDIINFTSKLLSEPQVKVQRNTLKMPALILDEKEKMISKFLSSNGLVEDPLAIEKERAMINPWTSDEREIFFEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTGLVASGKKWNREVDAASLEILSAASVMADGIACNRKLRAGSSLWRGYGNVKTSRGEYSIVERSSSFDIFGDERDTAAAADVLAGICGSLSSEAMSSCITSSIDPVEGNRDRKLLKENPLCKQPLMLDVSQDVDDDTCSDESCGEMDPTDWTDEEKAAFLQAVSSFGKDFAKIARCVGTRSQEQCKIFFSKARKCLGLDLMRPIPENVGSPVNDDANDGRSDTDDACVVDTDKSGTKTDEDLPSYVMNTYHDESTPGQVQKLSAELNKSKEINGTKTDLEDVNVVSDACTIKDEPKLGSDGCKVGLCSSEKLGSTSGQAAIFMSDSTEVGKDNANKLGGAVTDLISALEISEPCKSNSVAEYRLVSEVSSGGIVNGLERQRVSSPQCLDGSDKSKVDPDVVVKLKSSGQDSITTVNASLSSLGNSCSVSSFNTENKNVSLGKPHMSALSMEDLHPTANSLLQNTAATDFHSEKSASQDRLSSTCDIQGSRDMLCHKSISSGDHQLPIPGNSSDRVEAVSILQGYPLQVSIKKEVNGDMNCSSSATELPLLSQRIEKFDDHFKSLRYLSDSEKTSRNGDVKLFGKILTNPSSAQKPNLTAKGSEENGNHHPKLSSKSSSLKFNGHHNADGNLKILKFDRNDCNDYLGLENVPMRSYGYWDGNRIQTSLSSLPDSAILLAKYPAAFSNYPPSSAKLEQQTLQAFARNNDLHLNGAAAFTTRDINGSNALIDYQMFRSRDGPKVQPFMVDVKHCQDVFSEMQKRNGFEAISSLQQQGMGMMGMNGVGRAGILMGGSCSGVSDPVAAIKMHYSNSERYGGQTGSIKREDESWGGKGDLGR 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00016 1697 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1012 1061 IPR017930 -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 134 148 - -
Gabi4615g00016 1697 Coils Coil 422 449 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 243 267 - -
Gabi4615g00016 1697 SUPERFAMILY Homeodomain-like 779 839 IPR009057 -
Gabi4615g00016 1697 Gene3D - 974 1063 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1078 1100 - -
Gabi4615g00016 1697 Pfam Myb-like DNA-binding domain 1011 1051 IPR001005 -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1068 1103 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 116 133 - -
Gabi4615g00016 1697 Gene3D - 772 844 - -
Gabi4615g00016 1697 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1694 - -
Gabi4615g00016 1697 ProSiteProfiles SANT domain profile. 791 842 IPR017884 -
Gabi4615g00016 1697 ProSiteProfiles SANT domain profile. 1010 1058 IPR017884 -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 199 223 - -
Gabi4615g00016 1697 ProSiteProfiles Myb-like domain profile. 1012 1054 IPR001005 -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 199 228 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1675 1697 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1 155 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 8 45 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 76 111 - -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1679 1697 - -
Gabi4615g00016 1697 SUPERFAMILY Homeodomain-like 1009 1058 IPR009057 -
Gabi4615g00016 1697 SMART sant 792 840 IPR001005 -
Gabi4615g00016 1697 SMART sant 1008 1056 IPR001005 -
Gabi4615g00016 1697 MobiDBLite consensus disorder prediction 1451 1482 - -
Gabi4615g00016 1697 CDD SANT 1012 1050 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00016 Gabi-Chr4615 125544 135249 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4615g00016 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00016 - - gmx:100810588 2527.28