Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00015 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCACTAGGATCTGTGGCGAGATGGAGAGATTCGTCCCACCACCGAGACTTCAATCGGTGGGGATCCCCCGAGTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAGGTTGGCACCTGTTTTCCGAAGAATCTGGTCACGGGTATGCGATTTCTCGGACCGGTGACAAGATGCTGGAGGAAGATAGTCGGCCATCAATCTCACGGGGGGATGGAAAATATAGCAGGAGCAGTAGGGAGAATAGAGGACCCTTTGGCCCAAGAGATTGGAGAGGACATTCATGGGAAACCACCAATGGCTCTCTAAATGTGTCCAGGAGGCCACCAGATGTGAATAATGACCAGAGGTCAGTTGATGATGACCTAACTTATTCCTCTCATCCACATACTGATCTCGTAAACAGTTGGGATCAGCACCATTTGAAAGACCAGCATGATAGGATGGGTGGTGTCAATGGGTTGGGAACAGGTCCGAGATGTGATAGAGAGAATTCACTGGGTTCAATTGACTGGAAGCCACTCAAATGGACCCGTTCTGGAAGCCTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGGGCAGATTCCTATGAAGCGAAGACTGAGTTGCAACCCAAAAATGCAACTGCTATTGAGTCGCATTCTGGGGAAGTTGCTGCATGTGTGACATCTTCTGCACCATCTGAAGATACAACTTCTAGAAAGAAGCCTAGGCTAAACTGGGGAGAGGGTCTTGCAAAATATGAGAAGAAAAAAGTTGAGGGGCCTGATGTAAGTGCAAACAAAGATTGCCCTGTCCTGTCTACTAGTAACATGGAACCTTGTAACTTCCTCAGTCCCAGCTTAGTAGATAATAGCCCAAAAGTTACAGGATTTTCGGGCTGTGCATCTCCCGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTATTTGGAAAGACTGCCAATGTGGACAATGATGTTAGTAATTTGACCACTTCACCTGTTCCTGGGTCCCAAAATCATCTACCGGAAGTTTCTTTTAATTTAGAGAAATTGGATGATGACTCCTTGAATAATTTGGGTTCTTCAATTGTTGAGTTAGTACAATCTGATGATCCAAGTTCTGTGGATTCTGGTCTAGTGAGATCCAATGCAATGAATAAGTTGTTGATATGGAAAGCTGACATTTCAAAGGTAGTGGAGATGACTGAATCTGAAATTGATTCACTTGAAAATGAACTGAAGTCACTAAAACATGAATCTGTGGATGGATGTACGCGTCCAGCAGAATTGGGCTCACAGCTGGTAGATAAGAATGGAAAATCTTGTGAAGAACATGTTGGAGTCTCTGATAAGGTCACTTGGCCAGTGCCATTGAAAATTGTTACTTCTGATGAACCCGATGTGGAGAAGATGCCTCTTTCAACAAATTTACATAGTACTCATGAAAATGGCAATGAAGAGGATATTGATAGTCCAGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTGATTAAAGCAGTTTCTTCAATTGATACGAACCTCTCTGGGGACTTGGATGCTGTTCAGTCTACAGCCATGAAATGCTTAGTTCCCTGTACTTCTAGGAAAGATGCCAGTGCATCTGCTTGTGGTGATGGCAATATGTCTATGGATGTAAAGGATAGCATGGATGCCACCTCTGGTGCAAGCTTATGTTCTGGCATGGAGGATGTTTTATACAATACAATTATTTCTTCCAATAAAGAATCTGTCAGTAAAGCAGATGGAGTATTTGCTAAGTTATTACCCAAAGGATGCTGTGAGATTGGTAATATGGGAGCTGGCAGGAACTCATACTCCCATACATTGATTATGGAAAAATTTGCAGAGAAAAAGCAGTTTGCAAGATTTAAGGAAAGAGTTATCACACTTAAGTTCAAAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATAAAGAAATGCCGCCCAAAATCTCACAAGAAGAGTGAAATAAGTGTGCGAACTACCTGTAATGTTAATCCCAAGAATCGATCTTCCATTCGATCACGTTTTGCCTTCCCTGGAAATCATCTAAGCTTGGTGCCAACTTCTGATATAATTAATTTTACAAGCAAACTGCTTTCAGAACCCCAAGTTAAAGTTCAGAGGAATACCCTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATTTCAAAGTTCTTATCTAGTAATGGGTTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCAGATGAGAGAGAAATTTTCTTCGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGATTGTGTTGAATTCTACTACAAAAATCACAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTAGGGAAGTCATTTTCAGCTAAAACTGGCTTGGTGGCATCTGGTAAAAAATGGAATCGTGAAGTGGATGCTGCTTCGCTTGAGATTTTAAGTGCAGCTTCAGTGATGGCAGATGGCATTGCATGTAATAGAAAATTGCGTGCAGGAAGTTCCCTTTGGAGGGGATATGGTAATGTAAAAACATCAAGGGGCGAGTATAGCATCGTAGAGAGATCAAGCAGTTTTGACATTTTTGGGGATGAAAGAGACACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGAAGGTAACAGGGATAGAAAGCTCTTGAAAGAGAACCCTTTATGCAAACAACCCTTGATGCTTGATGTTTCTCAGGATGTTGATGATGACACTTGTTCAGATGAGAGCTGTGGCGAAATGGATCCAACTGATTGGACAGATGAGGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGCAAGGATTTTGCAAAGATAGCAAGGTGTGTAGGAACAAGGTCCCAAGAACAGTGCAAAATTTTCTTCAGCAAGGCTCGAAAATGCCTTGGATTGGATCTCATGCGCCCCATACCTGAAAATGTTGGATCTCCAGTGAATGATGATGCAAATGATGGCAGGAGTGACACAGATGATGCTTGTGTTGTTGATACTGATAAGTCTGGCACTAAAACAGATGAGGACCTTCCTTCCTATGTCATGAACACATACCATGATGAATCTACTCCCGGTCAAGTTCAGAAGCTTTCAGCTGAATTGAACAAATCAAAGGAAATTAATGGGACAAAAACAGATCTTGAAGATGTAAATGTGGTTTCTGATGCATGTACAATTAAGGACGAACCTAAACTGGGCTCTGATGGTTGTAAAGTTGGCTTGTGCAGTTCTGAGAAGCTTGGTTCAACCAGTGGACAAGCAGCTATATTTATGTCAGATAGTACAGAAGTTGGAAAAGATAATGCAAATAAATTGGGAGGTGCAGTTACAGATTTGATTTCTGCTTTGGAGATAAGTGAACCATGCAAGAGTAATTCTGTGGCTGAGTATAGATTGGTTTCTGAGGTTTCTTCTGGGGGTATTGTAAATGGATTGGAAAGGCAAAGAGTTTCTTCACCTCAATGTCTTGATGGAAGTGATAAAAGTAAAGTTGACCCAGATGTTGTAGTTAAATTGAAAAGCTCTGGGCAAGATTCAATCACTACAGTAAATGCGTCACTCTCTTCTTTGGGCAATTCTTGTTCAGTATCGAGTTTTAATACTGAAAATAAGAATGTGTCCCTTGGAAAGCCTCATATGTCAGCATTGTCTATGGAGGATCTTCATCCAACTGCAAATTCATTGTTGCAAAATACTGCTGCTACAGATTTTCATAGTGAGAAAAGTGCTAGCCAAGATCGACTGTCTTCTACTTGTGATATTCAGGGAAGTAGAGATATGCTTTGTCACAAGTCCATCAGCAGTGGTGACCATCAGCTTCCTATTCCTGGGAATTCATCAGACCGTGTTGAGGCAGTTAGCATCCTCCAGGGCTATCCTTTGCAAGTATCCATTAAGAAAGAAGTGAATGGGGACATGAATTGCAGCAGTTCAGCAACTGAGTTGCCTCTTCTGTCTCAAAGGATTGAAAAATTCGATGATCATTTCAAATCATTACGGTATTTGTCAGATTCTGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGTAAGATACTAACCAATCCTTCATCTGCTCAGAAACCTAATTTGACTGCCAAGGGAAGTGAAGAAAATGGTAACCATCATCCCAAGTTAAGCAGCAAGTCTTCTAGTCTGAAATTTAATGGCCATCATAATGCTGATGGAAATTTGAAAATTTTGAAGTTCGACCGTAATGACTGTAATGATTATCTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACAGAATTCAGACTAGTCTCTCATCCTTGCCCGATTCTGCCATCTTACTAGCTAAATATCCTGCTGCCTTTAGTAATTATCCTCCATCTTCTGCCAAATTGGAGCAACAGACATTGCAAGCATTTGCCAGGAATAATGATCTGCACCTGAATGGTGCAGCTGCTTTTACAACTAGAGACATCAATGGCAGCAATGCGTTGATTGATTATCAGATGTTTAGAAGTCGGGACGGTCCAAAAGTGCAGCCATTTATGGTAGATGTCAAGCACTGCCAAGATGTTTTTTCAGAGATGCAGAAAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAACAGCAGGGGATGGGAATGATGGGAATGAATGGTGTTGGAAGAGCGGGGATTCTTATGGGAGGATCATGCAGTGGAGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGAGAGGTATGGTGGTCAGACCGGGAGTATCAAAAGAGAAGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG 5091 0.4213 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSPEFRRPPGHGKQGGWHLFSEESGHGYAISRTGDKMLEEDSRPSISRGDGKYSRSSRENRGPFGPRDWRGHSWETTNGSLNVSRRPPDVNNDQRSVDDDLTYSSHPHTDLVNSWDQHHLKDQHDRMGGVNGLGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSYEAKTELQPKNATAIESHSGEVAACVTSSAPSEDTTSRKKPRLNWGEGLAKYEKKKVEGPDVSANKDCPVLSTSNMEPCNFLSPSLVDNSPKVTGFSGCASPATPSSVACSSSPGVDDKLFGKTANVDNDVSNLTTSPVPGSQNHLPEVSFNLEKLDDDSLNNLGSSIVELVQSDDPSSVDSGLVRSNAMNKLLIWKADISKVVEMTESEIDSLENELKSLKHESVDGCTRPAELGSQLVDKNGKSCEEHVGVSDKVTWPVPLKIVTSDEPDVEKMPLSTNLHSTHENGNEEDIDSPGTATSKFVEPLPLIKAVSSIDTNLSGDLDAVQSTAMKCLVPCTSRKDASASACGDGNMSMDVKDSMDATSGASLCSGMEDVLYNTIISSNKESVSKADGVFAKLLPKGCCEIGNMGAGRNSYSHTLIMEKFAEKKQFARFKERVITLKFKALHHLWKEDMRLLSIKKCRPKSHKKSEISVRTTCNVNPKNRSSIRSRFAFPGNHLSLVPTSDIINFTSKLLSEPQVKVQRNTLKMPALILDEKEKMISKFLSSNGLVEDPLAIEKERAMINPWTSDEREIFFEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTGLVASGKKWNREVDAASLEILSAASVMADGIACNRKLRAGSSLWRGYGNVKTSRGEYSIVERSSSFDIFGDERDTAAAADVLAGICGSLSSEAMSSCITSSIDPVEGNRDRKLLKENPLCKQPLMLDVSQDVDDDTCSDESCGEMDPTDWTDEEKAAFLQAVSSFGKDFAKIARCVGTRSQEQCKIFFSKARKCLGLDLMRPIPENVGSPVNDDANDGRSDTDDACVVDTDKSGTKTDEDLPSYVMNTYHDESTPGQVQKLSAELNKSKEINGTKTDLEDVNVVSDACTIKDEPKLGSDGCKVGLCSSEKLGSTSGQAAIFMSDSTEVGKDNANKLGGAVTDLISALEISEPCKSNSVAEYRLVSEVSSGGIVNGLERQRVSSPQCLDGSDKSKVDPDVVVKLKSSGQDSITTVNASLSSLGNSCSVSSFNTENKNVSLGKPHMSALSMEDLHPTANSLLQNTAATDFHSEKSASQDRLSSTCDIQGSRDMLCHKSISSGDHQLPIPGNSSDRVEAVSILQGYPLQVSIKKEVNGDMNCSSSATELPLLSQRIEKFDDHFKSLRYLSDSEKTSRNGDVKLFGKILTNPSSAQKPNLTAKGSEENGNHHPKLSSKSSSLKFNGHHNADGNLKILKFDRNDCNDYLGLENVPMRSYGYWDGNRIQTSLSSLPDSAILLAKYPAAFSNYPPSSAKLEQQTLQAFARNNDLHLNGAAAFTTRDINGSNALIDYQMFRSRDGPKVQPFMVDVKHCQDVFSEMQKRNGFEAISSLQQQGMGMMGMNGVGRAGILMGGSCSGVSDPVAAIKMHYSNSERYGGQTGSIKREDESWGGKGDLGR 1696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 134 148 - -
Gabi4615g00015 1696 SUPERFAMILY Homeodomain-like 1008 1057 IPR009057 -
Gabi4615g00015 1696 Coils Coil 422 449 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 243 267 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1067 1103 - -
Gabi4615g00015 1696 Pfam Myb-like DNA-binding domain 1010 1050 IPR001005 -
Gabi4615g00015 1696 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1011 1060 IPR017930 -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1077 1099 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1674 1696 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1450 1481 - -
Gabi4615g00015 1696 SMART sant 791 839 IPR001005 -
Gabi4615g00015 1696 SMART sant 1007 1055 IPR001005 -
Gabi4615g00015 1696 SUPERFAMILY Homeodomain-like 778 838 IPR009057 -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1678 1696 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 116 133 - -
Gabi4615g00015 1696 Gene3D - 771 843 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 199 223 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 199 228 - -
Gabi4615g00015 1696 CDD SANT 1011 1049 IPR001005 -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 1 155 - -
Gabi4615g00015 1696 ProSiteProfiles SANT domain profile. 790 841 IPR017884 -
Gabi4615g00015 1696 Gene3D - 973 1062 - -
Gabi4615g00015 1696 ProSiteProfiles SANT domain profile. 1009 1057 IPR017884 -
Gabi4615g00015 1696 ProSiteProfiles Myb-like domain profile. 1011 1053 IPR001005 -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 8 45 - -
Gabi4615g00015 1696 MobiDBLite consensus disorder prediction 76 111 - -
Gabi4615g00015 1696 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00015 Gabi-Chr4615 125544 135249 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4615g00015 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00015 - - gmx:100810588 2521.12