Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00007 ATGGGTAAGGAGAAGGTTCACATTAATATTGTGGTCATTGGCCATGTTGACTCTGGGAAGTCAACTACCACTGGCCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGATTTGAGAAAGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCGTGGGTGCTTGACAAGCTTAAGGCCGAGCGTGAAAGGGGAATCACCATTGATATTGCCTTGTGGAAGTTTGAGACAACTAAGTACTACTGCACAGTCATTGATGCACCTGGACACAGGGATTTCATTAAGAATATGATTACTGGGACATCCCAAGCTGACTGTGCTGTTCTTATTATTGATTCCACTACTGGTGGTTTTGAAGCTGGGATTTCCAAAGATGGTCAGACTCGCGAACATGCTCTCCTTGCTTTCACTCTTGGTGTGAGGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACTACACCCAAGTACTCGAAGTCTAGATATGATGAAATTGTTAAGGAAGTTTCTTCCTACTTGAAGAAGGTCGGGTACAACCCAGACAAGATCCCTTTCGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGAGGTCTACAAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGACGCCCTTGACCAGATCAATGAGCCGAAGAGACCATCAGACAAGCCCCTGCGATTACCCCTCCAGGATGTCTACAAGATTGGAGGAATAGGAACTGTGCCTGTGGGACGTGTTGAAACTGTTATCATTATGAATCACCCTGGACAGATTGGAAATGGCTATGCTCCTGTTCTTGATTGCCACACCTCTCACATTGCTGTCAAGTTTGCTGAGCTTATGACCAAGATTGACAGGCGATCTGGTAAGGAGCTTGAGAAGGAGCCCAAATTCCTGAAGAATGGAGATGCTGGTTTAGTTAAGATGATTCCCACCAAGCCCATGGTGGTTGAAACATTCTCTGAGTATCCTCCACTAGGTCGTTTTGCTGTAAGAGACATGCGTCAAACTGTGGCTGTGGGAGTCATCAAGAGCGTGGAGAAAAAGGATCCTTCTGGAGCTAAGGTCACCAAGGCTGCACAGAAGAAGGCCAAGTGA 1125 0.4596 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKAAQKKAK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00007 374 Pfam Elongation factor Tu GTP binding domain 6 222 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 Gene3D Translation factors 260 356 - -
Gabi4615g00007 374 PANTHER TRANSLATION FACTOR 4 260 - -
Gabi4615g00007 374 CDD EF1_alpha_III 258 352 - -
Gabi4615g00007 374 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Gabi4615g00007 374 Gene3D - 1 226 IPR027417 -
Gabi4615g00007 374 Gene3D Translation factors 230 259 - -
Gabi4615g00007 374 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Gabi4615g00007 374 FunFam Elongation factor 1-alpha 1 226 - -
Gabi4615g00007 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Gabi4615g00007 374 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 258 355 IPR009001 -
Gabi4615g00007 374 CDD EF1_alpha 9 227 - -
Gabi4615g00007 374 Pfam Elongation factor Tu C-terminal domain 257 355 IPR004160 -
Gabi4615g00007 374 FunFam Elongation factor 1-alpha 254 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00007 Gabi-Chr4615 49727 51504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00007 1 366 Eukaryotic Initiation Factors Gene Family AT1G07930 95.628 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00007 K03231 - acan:ACA1_200430 537.724