Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00004 ATGGCTGATGTTGATTACCATACAAAATCCAATACTACTACCACCCCATCAGTATTAAAGCTCTTTGGCATCAACATTCACAAATCCACAAAAGACACTGAAAATGAAGAAGATGGTTTGAATAATCAATATTCTCCAACAAGGTCTTATGCCAGAAAATTATATGAGTGCCAATACTGTTTCAGAGAATTCACCAATTCACAGGCATTAGGAGGACACCAAAACGCACACAAGAAAGAAAGACAACTTTTGAAACGTGCTCAAATGCAAGCTGCTCGTGGCTTTGTTATTGCTTCATCACATTCAAATCTCCACCATACAACCATATCAGGGTTCTCACCACCGTCTCAGCCACCTTCATCGTGGCTATACACGACGCATGCAGGTAGCCCAACCCATTCAGGAGCATTTGTAACTAATGCTGGAAGAGGTTTCTATGCTGCAGCTGGTGGTCGCTTAGGAGGATCTGTAACTGTCACAACAGCTTTACCTGATGGCCGTGGCCACCACCAGCCTCTGCCGGGGTTTGGTGGTTTCACCGGCGGCGATGGTGGTGGTCGTCTTCATAGTGAACAAGGGTTCGGCTTGGACTTGCAACTTAGCCTATGA 609 0.4532 MADVDYHTKSNTTTTPSVLKLFGINIHKSTKDTENEEDGLNNQYSPTRSYARKLYECQYCFREFTNSQALGGHQNAHKKERQLLKRAQMQAARGFVIASSHSNLHHTTISGFSPPSQPPSSWLYTTHAGSPTHSGAFVTNAGRGFYAAAGGRLGGSVTVTTALPDGRGHHQPLPGFGGFTGGDGGGRLHSEQGFGLDLQLSL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00004 202 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Gabi4615g00004 202 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Gabi4615g00004 202 PANTHER ZINC FINGER PROTEIN 5 7 202 IPR044299 GO:0010090
Gabi4615g00004 202 Gene3D Classic Zinc Finger 32 103 - -
Gabi4615g00004 202 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00004 Gabi-Chr4615 23744 24406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00004 12 202 C2H2 Transcription Factor Family AT1G67030 42.202 4.42e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gabi4615g00004 None None None