Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4615g00001 ATGGTAGCTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGGCGTATGAGAGTAGGGTAGTGACTAGGTTTGGAGCTGAGGCGCTGCAACTTAAGAGCGTTTTGTCACGAGCAAGGAAGTATAATCACCATCACCATCACCCAAAGCTTGCTTCTCCTTTGAAGAGCCCAAGAATCACTTCTGGGAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAGGTTAAAGGCAGAGCTAAAGGTTCTCTTACATATCCTGCTTCCATGTATCCTCCTAAGACTGGCATTGTGACAAATAGTGTGGGAAATGGGTCAGCAGTTATGCAAAACCAATCTTGCTATGATGCCTGCACAGCCAAGCCTTTGATGGGGCAGAGTTCATGCAAAAATTGTGGTAATTTACTTGATGTTTTTGACTGCAAGCAGGAGGTTGGGGGACTGCCGGCTGTTCCTCCACCCATTGTTTCGGATGTGATCACTGCTACCTCCATGGTATCGTCACAGAGGAAGGGAAAGTCATTCACTCCCTCTCATGAGCAAGAAAGAGGTGTAGTTCTTCTGAGAAGTCAGGAAAAGCTCATATCTGTTGTTACTGAAGAAGAGGGAAAAAATAATGCACAACAGTTAAGTAATGAAACCACTACCAGAAGAATGCCTATGCCCCGTGAAGGTCCAGCTACATGGAATTCATCACACCAACCATTTAGAACCCAAGAGGATGATGCATCTTCTTTTGCCATAAAACAAAAAACTCAAACACAAGAACAGATGTCAAGCAGCGAAAGATATTCATTTGGGTCTACAATGAGTGATATGCAAGTAAAAAGAGTATCATCATCTGCCAACACAGTGAGTGGGACTAAAGATTTTGTTGCTTTCAATAGAAGCCTGAGTGGTAGAACGAGGATGAGGTCACCTACCAAAGTGGACGGTTCCAAGTTTGACCTAGAGAAAAAACTTTGTAATAGACAGCATAATTCCTTGTCTCATGTAAGGTCATTAGAGAGGAAAAGAAGGACCCCAAATATCACACAACTTGAAGGCACAGCTTCTGTTAATTCAGTTGGTGTGAAACACAGAAATCTTCATTCTGATGCACCGGGTAGAAAAAGGAGAGACTTTGAGGGTTCCTCCTTGAATAGTTCTAATTTCAGAAATAAACAAGATGGTCAGGGAGGAACAGTTAAGTTTAATGACGATAAGATCAATGATGTAGTTTCATTTACATTTAATTCCCCATTGAAGCAAAAGATAGGAATAACTGCTGAGAAGGAAGAGACAAGCAGCGATAATGAGAGGAAGACATATTTCCAAAGACCTTCAGCTTTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAAAAAAAATTGAAGGAATTATCCTCTAAAGGAGATGAGGAGTTAGCTGCTGGTGCTCCACCTAAAAAACCAAGCGCCTTGATTATTCAAGAGCTGATATCTGCTCTAAGTTCAGAGCATCTGATCTGTCATGATGTTCATATGCTTGAGGAAAACGTTGGTTTCCATGTTAACTGCATAGACACATTGAAAGTTTATAGGGAAAAACAAGAAAGGTCATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCTTTTTCTTCCAATAGTCTGGACGAAAGCTCAGGGCATGGTTTTCACGCTGACTCCATGAATTATTCTTATGGTCAACTGGAACAATTAGAACATGACACTGAACTTTTAGATTCTGCAACATCCTTTAACAAAGGGAGGATAGGTGAGATACTGACTACTCTTGTCAACCAAATTCCTAAAGCATTACAGTGTTTATATTCTTTGGGAACACCATTGACAAGAAGCAACCTCAAGCATGTAAAGGATGTTCTCTTAAATGCTGAATTGGTGCTTGGAATTGCAACTGACCACAGTGAGGATGAAGTGCCACAACTTCTAATTTATAGGTTTTTCCTTAATGAACTGGACACTATGGCGGATGATGCTATGTGGACAGATTTTAATGGCTTTGTGGGTTGCGAGGATTCTAAACAAAGAAAGGAACTCAAGGGATTTCTCTTTGATTGTGTCATAGAATATCTAAAATCAAATTGCTGCCTGTATTTTAACTCTGGATTCAAGGCATGGACAAAGCTTCCGTTATGCATGGAAGCTGAGATGTTGACTGAAGAGGTCATGAGGGAGATCAAGAAGTGGGCATGTATGGCTGGGATGGTACCTGATGAAATAATAGAATGGGAGATGAGCCACTCCTTGGGAAAATGGACTGACTTTGATATTGAAGCATTTGAGGCTGGTGTTGATTTAGATGGAGACATACTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGGTTGCAATGAGAGCTCCATTTCCTTCTAA 2439 0.4104 MVAVKHDSRPQKLQKTGAYESRVVTRFGAEALQLKSVLSRARKYNHHHHHPKLASPLKSPRITSGKSASRSSRLIGAATKILEPGLQVKGRAKGSLTYPASMYPPKTGIVTNSVGNGSAVMQNQSCYDACTAKPLMGQSSCKNCGNLLDVFDCKQEVGGLPAVPPPIVSDVITATSMVSSQRKGKSFTPSHEQERGVVLLRSQEKLISVVTEEEGKNNAQQLSNETTTRRMPMPREGPATWNSSHQPFRTQEDDASSFAIKQKTQTQEQMSSSERYSFGSTMSDMQVKRVSSSANTVSGTKDFVAFNRSLSGRTRMRSPTKVDGSKFDLEKKLCNRQHNSLSHVRSLERKRRTPNITQLEGTASVNSVGVKHRNLHSDAPGRKRRDFEGSSLNSSNFRNKQDGQGGTVKFNDDKINDVVSFTFNSPLKQKIGITAEKEETSSDNERKTYFQRPSALRVDALGAFLEKKLKELSSKGDEELAAGAPPKKPSALIIQELISALSSEHLICHDVHMLEENVGFHVNCIDTLKVYREKQERSLGTSCNGNHLSPGSVLEASFSSNSLDESSGHGFHADSMNYSYGQLEQLEHDTELLDSATSFNKGRIGEILTTLVNQIPKALQCLYSLGTPLTRSNLKHVKDVLLNAELVLGIATDHSEDEVPQLLIYRFFLNELDTMADDAMWTDFNGFVGCEDSKQRKELKGFLFDCVIEYLKSNCCLYFNSGFKAWTKLPLCMEAEMLTEEVMREIKKWACMAGMVPDEIIEWEMSHSLGKWTDFDIEAFEAGVDLDGDILQILVDEIVEDLVGCNESSISF 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 375 389 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 42 71 - -
Gabi4615g00001 812 Pfam Domain of unknown function (DUF4378) 634 797 IPR025486 -
Gabi4615g00001 812 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 4 801 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 213 230 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 213 250 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 390 406 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 340 355 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 356 371 - -
Gabi4615g00001 812 MobiDBLite consensus disorder prediction 340 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4615g00001 Gabi-Chr4615 12760 15658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4615g00001 9 802 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.362 1.64e-51 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4615g00001 - - aprc:113861902 1177.54