Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4610g00003 ATGTCAGAATCAAACGCAATAGCAAATGGTTTAGCTGGTGCAGGTGGTGGTATTATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACACGCCAACAAACTGAGAGAAATCTCAAGAAAAACAAGCTAACTCCTAGTACTGTTACTGCTCCTGGTACTCTTCTTCAGATCTTTCAGGTTATTGGAAGTGAAGGGTGGGGTGGATTATACAGTGGCCTCAAACCTTCTCTTCTTGGAACCGCTGCTTCTCAGGGAATTTACTACTACTTCTATCAAGTTTTTAAGAACAAGGCTGTGGCAATTGCAGCTGCTAGGAAAGTCAAAGGGCATGGAGATGGTACTGTTGGAATGTTTGGTTGGCTTGTTGTGGCTGCTATTGCTGGGTCCTTGAATGTATTGTTTACAAACCCAATATGGGTTCTAGTAACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGACGAAAAGAAAGAAGCTTTAAGGAGGGCTGCTTCTGAAAGCAGCTTATCAGACTCTACATTACAAGACAAATTGGCTGAACTGCATTCTATAAAACCTCGACCATTTGGAACTATACAAGCAGTTAATGAAGTCTATGGTGAAGCGGGTATAATTGGATTTTGGAAGGGTGTCATTCCTGCTCTTATTATGGTATGCAATCCATCAATCCAGTTCATGATTTATGAGAGCACATTAAAGCATATAAGGGCAAAACGCTCTGCTAAGAAGCAGGGAGATACAAGTGTAACTGCTTTGGAGGTCTTTTTGGTGGGAGCATTAGCAAAACTTGGAGCTACTGTCTCAACATATCCCTTACTTGTTGTCAAGTCAAGGCTTCAGGCAAAACAGGCGATTGGCGGAAGTAACTCATTAAGATACTCAGGTACTTTTGATGCAGTATTAAAAATAATCCGTTATGAAGGATTGCCTAGCTTTTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCTTCTGTTCTATTCATGGTCAAGGAGGAGCTTGTTAAGGCTTTCATGTTGCTGGCAAAAAAGAGCAAAAAAGTTGTAGTAAATTTGAGTAGTTGA 1089 0.4059 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERNLKKNKLTPSTVTAPGTLLQIFQVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGHGDGTVGMFGWLVVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKIMDEKKEALRRAASESSLSDSTLQDKLAELHSIKPRPFGTIQAVNEVYGEAGIIGFWKGVIPALIMVCNPSIQFMIYESTLKHIRAKRSAKKQGDTSVTALEVFLVGALAKLGATVSTYPLLVVKSRLQAKQAIGGSNSLRYSGTFDAVLKIIRYEGLPSFYKGMSTKIVQSVFAASVLFMVKEELVKAFMLLAKKSKKVVVNLSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4610g00003 362 Gene3D Mitochondrial carrier domain 9 357 IPR023395 -
Gabi4610g00003 362 Pfam Mitochondrial carrier protein 4 98 IPR018108 -
Gabi4610g00003 362 Pfam Mitochondrial carrier protein 254 347 IPR018108 -
Gabi4610g00003 362 Pfam Mitochondrial carrier protein 117 241 IPR018108 -
Gabi4610g00003 362 SUPERFAMILY Mitochondrial carrier 5 341 IPR023395 -
Gabi4610g00003 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 254 345 IPR018108 -
Gabi4610g00003 362 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 352 IPR044712 GO:0006862|GO:0055085
Gabi4610g00003 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 99 IPR018108 -
Gabi4610g00003 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 239 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4610g00003 Gabi-Chr4610 44182 52910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4610g00003 26 348 Chloroplast and Mitochondria Gene Families AT2G47490 28.221 1.48e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4610g00003 K13354 - gmx:100775304 576.244