Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4608g00008 ATGAGGGAGCTGGTTGCGGTAAAGGTTGTGCGGAGTATTAGGAAATATCGTGAAGCGGCAATGTTAGAAGTTGATGTGCTCCAGTTGCTTGGGAAGTATGACAGGAGTGGCAGCCGCTGTGTTCAAATACGGAATTGGTTTGACTACCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACGGAAGAACAATTATTGCCCATTTCCGGTTGATCTTGTCCGTGAGCTAGGCAGACAACTGTTAGAATGTGTAGCATTCATGCATGATTTGCGCCTCATCCACACTGACTTGAAGCCTGAAAATATACTTTTTATTTCCCCAGAATATGTAAAAGTTCCTGACTCCAACTCCAAGGTTACATTCCGGTCTCCAAAAGAGGGAACCACTTATAAGAGACTGCCAAAGTCAAGTGCTATTAAGGTTATTGATTTTGGTAGTACAGCCTATGAGCACCAAGATCACAACTATATTGTCTCTACTAGGCATTATCGTGCACCTGAGGTTATTCTTGGTCTTGGGTGGAATTTTCCTTGTGACATATGGAGTGTTGGCTGCATTTTGGTTGAGTTGTGCTCGGGAGAAGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTAGGCCCAATACCTCAGCACATGTTGAAAAGAGCAGACCGGCAAGCACAGAAGTATGTCAGAAGGGGTAGACTGAACTGGCCGGAAGGAGCAGTCTCTCGAGAAAGCATCAAGGCTGTCTTGAAACTACCTCGTCTTCCTAATCTGGTGATGCAGCACGTGGATCACTCTGCTGGGGATCTTCTTGATCTCTTGCAGGGTCTGCTTAGGTTTGACCCCTCAAGTAGGCTGAAGGCTCATGAAGCCCTCAGGCATCCCTTCTTGACTGGGGAACATTACCAAAGATTTTAA 951 0.4501 MRELVAVKVVRSIRKYREAAMLEVDVLQLLGKYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYCPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFISPEYVKVPDSNSKVTFRSPKEGTTYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWNFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRADRQAQKYVRRGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLLQGLLRFDPSSRLKAHEALRHPFLTGEHYQRF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4608g00008 316 Gene3D Transferase(Phosphotransferase) domain 1 33 308 - -
Gabi4608g00008 316 Gene3D Phosphorylase Kinase; domain 1 3 59 - -
Gabi4608g00008 316 SMART serkin_6 3 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4608g00008 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Gabi4608g00008 316 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 311 - -
Gabi4608g00008 316 CDD PKc_CLK 2 308 - -
Gabi4608g00008 316 SUPERFAMILY Protein kinase-like (PK-like) 3 312 IPR011009 -
Gabi4608g00008 316 Pfam Protein kinase domain 3 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4608g00008 316 FunFam Serine/threonine-protein kinase AFC2 55 308 - -
Gabi4608g00008 316 ProSiteProfiles Protein kinase domain profile. 1 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4608g00008 Gabi-Chr4608 60050 63404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4608g00008 51 312 MAP Kinase Gene Family AT4G01370 30.483 1.38e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Gabi4608g00008 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4608g00008 K08287 - qsu:112037155 578.941