Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4607g00013 ATGGCAATGGCAATGCCTCTTACTCTAAGGCATAAGCTCAAGACTCTTTGTACTTGTGGGGATGGCTGGTCTTACGCCATTTTCTGGCGCTTCAATCCACAAAATTCCTTGATGTTGAGTGTGGAAGAAGCATACTATGAAGAGCAATTGGGAGAAGAGATTACCAACATGCTTCCACAGGTCCACTTGTTGGGCGAAGGAATTATTAGTGAAGCTGCTTTCACGGGCAAGCACAGTTGGGTGCACTCAGATGGTCAAACCCAAGAATGGAATTTGACTGGGAAGAATATTTATGAGGATGATTCTGGATTGCATCAACAATTATCCTATGGGATAAAGACAATGGTGATCATACCTGTCAAAGATTTGGGAGTTGTACAGTTTGGATCGAAAAAGAAGATTTTGGAGAGAATGGAGTTTTTGGATCAAACACTAAGCTTACTCATGGAGACAGATAATATGGGTATGCTTGACGTGTCAGGAAATGCAGTTTCATCTCTGGATTGTGAAAATTATGACCTAAATGGGTTGTTGGCTTCCGTTTCTTCTGAAAATTCATATGATTGGAATCTCAACTATGCTCATAATGAAAACTCTGAAGAGCTATTGAGAAAGGTTTATTCTTCTGTAAATCCAAACGATCCCTTCCCATCCCAATATAAGATTTACGAAGAAGGAATGACTTCATTGGGAGTAGATTCTTCCTGTCTTGGTGACCAATTGAATGGCACCACAGAAGCTCAAGTTGTATTATCAGATTGGGATAGTACAGATGTGCTTTTGAAGCCTAACTCTTCTATGGACAGCTTAATTCCCCAAAACTCCAGTTTTGGTGCATGGAATGATGAAGCATCTTCTTTTGATTTGTTGGGGGAACAATTGTTATCTGAAATAAGGACACAAGAAGCTTCAGATATGTGTTCTACAGAAGAAAATGCGTTTGCTAGTAGCACTAGCAAACTTCTAGTTCAGGATTCAGTATTGACCTCATTGGACAAAATGAACAGAGGGTCATTTCAAGACAAGTTACGAAATTCATTAGATAACCAACCTCAATCCATGGATGATGTTTGCCAGTGGTTTGCTGCTTCTCCAGAAGATAGCATCTGCAGAACAGTAAATACATTGGACAACAACAACCATGACTTTGAAAATAGTCTCTTGGATGGCATGGAACTTGATTTCAACTGTGATCAAGATGATAAATGGTGGGAGAATATACTTACACCAGGGGTGAACGCTGCTATTGATACTGGCTTTTCTAAATGCATATCAGAGTTGAATATTGGTTCACACTCTAGCACCCAACAGCGATTGTTCTCACAGTTAGGAAATGAACAGCTTTTGAGTGGTGAAGCAAATTACAATACTTCTAACAGTTTTGGTTTTGAGAATGAGTTATTATCACCCAATAAGAGGCAGATGTTAGAATTTCCACCAGTGAATGCAAGCCCATTACACTTTGCAAACCTTGCTGGGGCTGAGGCTAGAGCAAACTTGATGCAGCCCGTTTCTGACTTGTACAAGACAAACAATTCTTTAAGCAAGAAAGATACATTCCCAAAATCAGAAGTAGGCATGCGGATTGATGATAGCCATAGCATTAATATTGGGAAGGCTGTTCCAGGACACTTTGAAAAGCCCAAGGAACCCACAAAGGCCAACAAGAGGAGGGCTAAGCCCGGGAAGAGTACTCGACCACGACCCAAAGATCGCCAACAGATCCAAGACTGCATTAAAGAGTTGAGAAAAATCATCCCCAATGGTGAAAAGTGTAGCATTGATTCTTTGTTAGACCGAACCACCGCATACATGCATTTCTTACAAAATATGACCAAGTATGCAGACAGGATGCAGGAACCGAATGAGCCAAAGCTTATTGACCAGCCAAATGGAGTGGTTCGAAGAGAAAGTAGTGCGGGAGATAGCAAAAACTGTGGTGTTACATGTGCATTTGAAGTAGCATCCGAAACAATGATATGTCCAATTATAGTTGAGGATATGAGCCCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGAGCAGGGTTTCTTCCTTGAGTTAGTTGACAAAATTCGGGATGATTTTGGGTTGAACATCTTGAAAGCAAAGATGGAAATTAGGAAGAACAAACTATGGGCACGCTTTATTGTTGAGGTAAAGCCACAGGCAAATAGATACGTGACAAGGATACATGTATTTTGGTCCCTCACCCTTCTTCTCCAGCAAACAAACACCTCTGGAATGGATTCTGCTAATAAGCATTGCAATGTTATGGATGCCAATATTTCTTAA 2298 0.4073 MAMAMPLTLRHKLKTLCTCGDGWSYAIFWRFNPQNSLMLSVEEAYYEEQLGEEITNMLPQVHLLGEGIISEAAFTGKHSWVHSDGQTQEWNLTGKNIYEDDSGLHQQLSYGIKTMVIIPVKDLGVVQFGSKKKILERMEFLDQTLSLLMETDNMGMLDVSGNAVSSLDCENYDLNGLLASVSSENSYDWNLNYAHNENSEELLRKVYSSVNPNDPFPSQYKIYEEGMTSLGVDSSCLGDQLNGTTEAQVVLSDWDSTDVLLKPNSSMDSLIPQNSSFGAWNDEASSFDLLGEQLLSEIRTQEASDMCSTEENAFASSTSKLLVQDSVLTSLDKMNRGSFQDKLRNSLDNQPQSMDDVCQWFAASPEDSICRTVNTLDNNNHDFENSLLDGMELDFNCDQDDKWWENILTPGVNAAIDTGFSKCISELNIGSHSSTQQRLFSQLGNEQLLSGEANYNTSNSFGFENELLSPNKRQMLEFPPVNASPLHFANLAGAEARANLMQPVSDLYKTNNSLSKKDTFPKSEVGMRIDDSHSINIGKAVPGHFEKPKEPTKANKRRAKPGKSTRPRPKDRQQIQDCIKELRKIIPNGEKCSIDSLLDRTTAYMHFLQNMTKYADRMQEPNEPKLIDQPNGVVRRESSAGDSKNCGVTCAFEVASETMICPIIVEDMSPPGQMLIEMLCEEQGFFLELVDKIRDDFGLNILKAKMEIRKNKLWARFIVEVKPQANRYVTRIHVFWSLTLLLQQTNTSGMDSANKHCNVMDANIS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4607g00013 765 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 758 IPR043561 GO:0003700|GO:0006355
Gabi4607g00013 765 MobiDBLite consensus disorder prediction 515 574 - -
Gabi4607g00013 765 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 559 608 IPR011598 GO:0046983
Gabi4607g00013 765 MobiDBLite consensus disorder prediction 543 557 - -
Gabi4607g00013 765 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 49 IPR025610 -
Gabi4607g00013 765 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 54 144 IPR025610 -
Gabi4607g00013 765 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 572 614 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4607g00013 Gabi-Chr4607 73696 77472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4607g00013 523 752 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.887 5.19e-56 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4607g00013 - - gmx:100798158 895.96