Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4607g00005 ATGAGTTCGAGTTCGAGAAGCAGCAGCAGAACCTACTCTGCTAATCCCAGCGATTACAACCTTCTAGAAGAGGTCGGTTACGGTGCAAGCGCCACCGTGTACCGCGCAATCTACCTTCCTCGGAACGAAGAGGTGGCGGTTAAGTGTCTGGATCTGGATCGCTGCAACAGCAATCTCGATGACATAAGGAGAGAGGCTCAAACCATGAGCTTAATTGACCATCCTAACGTTGTGAGGTCTTATTGTTCCTTCGTTGTTGAACGAAACCTTTGGGTTGTGATGGCTTTCATGGCTCAGGGTTCTTGTTTGCACCTCATGAAATCTTCGTATCCTGATGGTTTCGAAGAAGACGCAATCGGATCTATCCTTAAGGAAACTCTCAAGGCCTTGGAGTACCTTCATCGACAGGGTCACATTCATCGCGATGTTAAGGCTGGGAATATTTTACTCGATTCTAACGGCGAAGTCAAACTCGCTGACTTCGGTGTTTCCGCTTGCATGTTTGATGCCGGTGATCGACAACGTTCTAGAAACACTTTCGTCGGAACTCCTTGCTGGATGGCACCTGAGGTACTGCAACCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTGGAGTTGGCTCATGGTCATGCACCTTTCTCAAAATACCCTCCGATGAAGGTTCTTCTAATGACCATACAGAATGCTCCTCCAGGGCTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCCGTGGAGAAGTTGCTGAAACATTCTTTCTTCAAACAAGCTAAGCCTCCTGAGCTTTCTGTGAAGAAATTATTTGCTGATTTACCACCTCTTTGGCATCGTGTAAAAAACCTCCAGATTAAAGATGCAGCTCAACTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATCAACGAGGAGTTAGTGCGTGGAACTTTGATATTAATGATTTGAAAGCTCAAGCTTCATTGGTGCAGGATGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGATACTACTGATTCTCAGTTTAGTGTGGGCAAAAAGTATTCAGATAACCTACAACAAGATGAGTTCACGTTACAAGTAGGTGGTAATGACATACCACAGAATGAGAAGAGAAATGGATTAATTGCTGAGGCAACGCCATCTATCTCAGAGAAGGATATGGGAATAAGCAGGGTTAAAACTCAATCATTGAAAACTTGTAAAACCCAAAGTGGGCCACTGGTGCCAGGTGCAGTGCTTGGTCATTCTATACCAGACAGAGGGCGTGCGTTTGAAAGGTTTGAGAATGAAAATCAGTTATCAAATGAGAAAAGTAATGTACGACGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCAAACCGAGCTTCGGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAAGCTAATCTAGTTCAAATTAAAGGACGATTCTCAGTGACGTCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAGGAATCGGCACTGAGGAAATCTGCCAGTGTTGGCGATTGGATGTTGGATTTCAAACAAATGCCAATTGGTCAGTCCTCCAATGATTCTGCCAATATCAATATACCAGCATCACTTCTTGTGCCTCACCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAACTGCTGAGGCAATTGATGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCAGTTCAGAGAACAATGGAAGTGTTGATACAGCAGCTTCAGAGAGGGAACAGCTTCTGCTGCTAAAAATTTCAGAACTTCAATCTCGGATGATCAATTTGACTGATGAACTGACTTCTGAGAAGTTAAAATACACGCAGTTGCAACAACAGCTAGCTGCTCACTACAGCCAGGAACAAAATGGGGAAAGAGAGGAAGTTGCATGA 2121 0.4295 MSSSSRSSSRTYSANPSDYNLLEEVGYGASATVYRAIYLPRNEEVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVVRSYCSFVVERNLWVVMAFMAQGSCLHLMKSSYPDGFEEDAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGEVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLWHRVKNLQIKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDINDLKAQASLVQDDDDIAEMREEDENKFFSSYKDTTDSQFSVGKKYSDNLQQDEFTLQVGGNDIPQNEKRNGLIAEATPSISEKDMGISRVKTQSLKTCKTQSGPLVPGAVLGHSIPDRGRAFERFENENQLSNEKSNVRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQESALRKSASVGDWMLDFKQMPIGQSSNDSANINIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQTAEAIDASQNGKLPPLPRSSENNGSVDTAASEREQLLLLKISELQSRMINLTDELTSEKLKYTQLQQQLAAHYSQEQNGEREEVA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4607g00005 706 Gene3D Transferase(Phosphotransferase) domain 1 100 332 - -
Gabi4607g00005 706 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 100 330 - -
Gabi4607g00005 706 SUPERFAMILY Protein kinase-like (PK-like) 17 335 IPR011009 -
Gabi4607g00005 706 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 680 IPR047173 GO:0043539
Gabi4607g00005 706 Pfam Protein kinase domain 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4607g00005 706 Coils Coil 662 689 - -
Gabi4607g00005 706 Gene3D Phosphorylase Kinase; domain 1 8 96 - -
Gabi4607g00005 706 SMART serkin_6 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4607g00005 706 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gabi4607g00005 706 FunFam Serine/threonine-protein kinase BLUS1 8 96 - -
Gabi4607g00005 706 MobiDBLite consensus disorder prediction 630 649 - -
Gabi4607g00005 706 ProSiteProfiles Protein kinase domain profile. 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4607g00005 706 CDD STKc_OSR1_SPAK 17 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4607g00005 Gabi-Chr4607 32559 46992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4607g00005 12 698 MAP Kinase Kinase Kinase Kinase AT4G10730 67.288 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi4607g00005 Pkinase 1.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4607g00005 - - gmx:100783699 1230.7