Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4607g00001 ATGCCTGAACCGGAATCGCAGAACGGACTTCGACAAGAGCCTGAACCAGAACAAGAACCAAAATCAAATCCGAAGCCAGAAACAGAAACAGAACCAGAACCAAATCCACAGCCAGAACCAAATCTAGAGCCAGAACCAAATCCGCAGCTAGAAACAGAAACAGAACCAGAACCAGAACCAAATCCACAGCCAGAACCAAATCCGCAGCCAGAAACAGAACCAGAGCCAAATCCGCAGCCAGAAACAGAACTGGTGCCAACAGAACAAACGCAAACGCAATTGGAGTTGGAATCTGGATCAGTAGCTGATCCATCGGTTAACAACGCAGATCTCAGGGAAACCGCGATTCATTCCAATGATGCGGATACCAATCCTTCACCGCATCCTCAGCTGCGAAAAGACGAAGGAAGTCGAACTTTCACCATGAGAGAATTGCTAAACGGTTTGAAAAATGATTCTGAACCGGAGAGAGAAGATGCCAACTCTCCCTACAGCCCAGAAAGTCAACAGCAACAGCATTCAGACCAGAACAACGCTGCAATGGATTTGATAAATAGTGTTGTTGGTGTTGATGAGGAGGGCCGGTCCCGACAACGGATTCTTACATTTGCTGCAAGGAGGTATGCTACTGCAATTGAGAGGAACCCGGAAGATTATGATGCCCTATACAATTGGGCATTGGTACTTCAGGAAAGTGCAGATAATGTTAGTCCAGATTCCACTTCACCTTCTAAAGACGCTTTGCTTGAGGAAGCTTGTAAAAAATATGATGAAGCCACTCACCTTTGTCCCACCCTACATGATGCTTTCTACAATTGGGCTATAGCAATCTCTGATCGGGCAAAGATGCGTGGTCGCACAAAGGAAGCTGAAGAGCTATGGAAACAGGCAACAAGGAACTATGAAAAAGCAGTCCAGCTCAACTGGAACAGTCCTCAGGCACTTAATAATTGGGGACTTGCTCTTCAGGAACTCAGCGCCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACTGCTATCAGCAAGTTCCGGGCAGCCATACAGTTGCAATTTGATTTCCATCGGGCAATTTACAATCTGGGAACTGTTCTGTACGGATTAGCAGAGGATACTTTAAGAACTGGGGGATCAATGAGTGCTCAAGAAGTTTCACCAAATGAATTGTACAGCCAATCGGCAATATATATTGCAGCTGCTCATGCATTGAAACCAAATTATTCAGTTTATAGCAGTGCCTTGCGGTTGGTGCGTTCTATGCTACCATTACCACACCTTAAATTTGGATATTTAACTGCACCTCCTGTGGGGACAACAATTGCACCTCATAATGACTGGAAACGGTCAGAATTTCTTTTGGATCATGAAAGGCTTCAACAGATACCCAGAGGTGAACAGAGACAAGTACCTCAAAGTCTCTCTGGCAGATCAACAGATGCTGTGAATGGGGATAAGAAGACTATCAGAGTAGATATAGCAGATATTATTTCTGTATCAGCATGTGCTGATCTGACTTTACCACCTGGTGCTGGCCTCTGCATAAATACAAGTCACGGATCAGTTTTCTTGGTTGCTGACTCGTGGGAATCATTGGATGGATGGCTGGATGCAATTCGTCTAGTTTACACAATTTATGTGCGAGGCAAAAGTGATGTACTGGCCGGTATTATTACAGGATGA 1683 0.4486 MPEPESQNGLRQEPEPEQEPKSNPKPETETEPEPNPQPEPNLEPEPNPQLETETEPEPEPNPQPEPNPQPETEPEPNPQPETELVPTEQTQTQLELESGSVADPSVNNADLRETAIHSNDADTNPSPHPQLRKDEGSRTFTMRELLNGLKNDSEPEREDANSPYSPESQQQQHSDQNNAAMDLINSVVGVDEEGRSRQRILTFAARRYATAIERNPEDYDALYNWALVLQESADNVSPDSTSPSKDALLEEACKKYDEATHLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATRNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQKIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGSMSAQEVSPNELYSQSAIYIAAAHALKPNYSVYSSALRLVRSMLPLPHLKFGYLTAPPVGTTIAPHNDWKRSEFLLDHERLQQIPRGEQRQVPQSLSGRSTDAVNGDKKTIRVDIADIISVSACADLTLPPGAGLCINTSHGSVFLVADSWESLDGWLDAIRLVYTIYVRGKSDVLAGIITG 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4607g00001 560 SUPERFAMILY TPR-like 284 415 IPR011990 GO:0005515
Gabi4607g00001 560 MobiDBLite consensus disorder prediction 162 176 - -
Gabi4607g00001 560 MobiDBLite consensus disorder prediction 82 126 - -
Gabi4607g00001 560 MobiDBLite consensus disorder prediction 10 28 - -
Gabi4607g00001 560 MobiDBLite consensus disorder prediction 1 176 - -
Gabi4607g00001 560 MobiDBLite consensus disorder prediction 29 81 - -
Gabi4607g00001 560 SUPERFAMILY TPR-like 204 326 IPR011990 GO:0005515
Gabi4607g00001 560 Pfam Plant specific mitochondrial import receptor subunit TOM20 202 307 - -
Gabi4607g00001 560 PANTHER - 27 560 - -
Gabi4607g00001 560 Gene3D Tetratricopeptide repeat domain 310 429 IPR011990 GO:0005515
Gabi4607g00001 560 Gene3D Tetratricopeptide repeat domain 190 309 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4607g00001 18 83 PP2C-type Phosphatase Gene Family AT5G53140 44.286 1.48e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4607g00001 - - gmx:100786164 904.82