Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4606g00001 ATGGAAAATCAATCTCCAAATGGCAAAAAGGAAATGGAAGAAGAGCTAATAAGAGGGCGTCACATGGCAAACGAGTTACTTGAAGTAATTGCAAACGAGGAAGGGTCAAAGTCAGTGTTACCAGTTGCTGAAGATCTTGTTCGCAATGTAATGAGATCATTCACAAATACCCTTTTGCTCTTGAACACCAACCATGATGACTCCAATGATGTGGCGGCGCCTATCCCTACTGGAGATCTCTCTTTCTCCACTAAATGCCCAAAGCTGAAGGATATGGCTGAAACTTGCAAGAATATCAAAACTCTCAACACCAAAAATCGAAGAGGGTGCTACAAGAGAAAATCAATTGCGCCAACTTGGGAGAAGGACAACTCAATTCTAATTGAAGATGGCCATGGGTGGAGAAAGTACGGACAAAAAATGACAATGAATGCCAAATATCTAAGGAGCTACTACAGGTGTACTCACAAGTATGATGAGGGTTGCGAAGCAATCAAACATGTTCAGAGAATTCAAAAAGACCCTCCATTGTACCGGACAACGTATTATGGCTATCACACTTGCAAAAGCCCTTTGAATCCCGAGATAATCTTGGAACCTGTTTCTTCCTCTGGCTCCTCTACACTACTTAGCTTTAATAACAGCCTTCCAAGCAAACAAGAACACCCGTTTTCATCTCCATTTTTTGCATCAAAGCAACAGAAGCCAATGGAAGTGGTTCACTATGACCATATTGCTCAAAACCAATTGGCCTCCTCAGAAGACCTCCTATTATGCGATTATGAAATTTATTACGATTATTCGAGGCATGTCACTATGCTATCATCAACAGAATTTGTTGAATTTGACAATGTTTATGAGCAGTTTGGATTTTGA 876 0.4064 MENQSPNGKKEMEEELIRGRHMANELLEVIANEEGSKSVLPVAEDLVRNVMRSFTNTLLLLNTNHDDSNDVAAPIPTGDLSFSTKCPKLKDMAETCKNIKTLNTKNRRGCYKRKSIAPTWEKDNSILIEDGHGWRKYGQKMTMNAKYLRSYYRCTHKYDEGCEAIKHVQRIQKDPPLYRTTYYGYHTCKSPLNPEIILEPVSSSGSSTLLSFNNSLPSKQEHPFSSPFFASKQQKPMEVVHYDHIAQNQLASSEDLLLCDYEIYYDYSRHVTMLSSTEFVEFDNVYEQFGF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4606g00001 291 SUPERFAMILY WRKY DNA-binding domain 124 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4606g00001 291 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4606g00001 291 Pfam WRKY DNA -binding domain 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4606g00001 291 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4606g00001 291 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 214 IPR044810 GO:0003700
Gabi4606g00001 291 Gene3D WRKY domain 112 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4606g00001 Gabi-Chr4606 44011 47736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4606g00001 15 190 WRKY Transcription Factor Family AT3G56400 36.872 2.15e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4606g00001 WRKY 1.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4606g00001 - - gmx:100792193 382.104