Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi45g00002 ATGGGGAGGAAAGGGGGTTGGTTTTCTTCAGTGAAGAAGGTTTTCATTTCTGATTCCAAAAAAGATCAGAAAGCACAGAAACATCATAAGTCCAAGTTAACATGTTTTGGACATTATCATGGGGATCCAGAACCAGCATGTGAAGAATCAGCAATTGCTGTTGTTCCCGCTCTTCCACCTAGAAAACGAGTTAAACCAAAAAAAACTGAGGCAGAGAATGAAGAGAACAAACAAGCTTTTTCTTTGGTTTTAGCCACTGCTGTCGCAGCAGGTGCTGCTGTTGCTGCTGCTGCAGAGGTTTCTCGTCTCAAAACTGAGCCTCGTTACCCTGGAAAATCAAATGAAGAGATAGCAGCTATCAAGATTCAATCGGCATTCCGTGGATATTTGGCAAGAAGATCATTGCGTGCCTTGAGAGGTTTGAAGAGGTTGAGAACATTGGTACAAGGGCAATCTGTTCAGAGGCAAGCAGCTACCACCTTACAATGCATGCAAACTCTTTCCCGATTGCAGTCTCAGGTTCGTGCAAGGAAGATTAGAATGTCTGAGGAGAACCAGGCTCTTCAGCAGCAACTGCAGCAGAAACGGGAAAAGGAACTTGAGAAGTTGCAAGCTTCTCAGGTTGGAGAAAAATGGGATGATAGCTCGAAATCAAAGGAGCAAATTGAAGCAAAATTGTTGAACAGACAAGTAGCTGCTATGAGAAGAGAGAGGGCTATGGCCTATGCATTAGCACATCAGCAAACATGGAGGAACTCTTCAAAATCTGCAAATGCCACATTTATGGATCCAAACAATCCCCATTGGGGCTGGAATTGGCTAGAGAGATGGATGGCTACACGGCCATGGGAAGGACAAAACACTATGTATAACAATGACCATTCATCTATAAAGAGTGCTGCAGGCCATAATACCATGTCAGTTGGGGAACTCACCAAATTGTATGCTCAACGTGACCAGAACCTTGATACTAAGAACTCCCCTGCTAGCCAAAAAGTAAAATCTCCTCGCAGTCACAATCCCCCTTCAAAACTAGCTTCAAAGGCCTCACCATCTTTGACATCTTCCAATAGTGGAAAGACAAAGGCACCAAGTCCAAAGGGTGGTTCATGGGGTGGTGATGGTGACTTAAGAAACATATTTAGCAAAAACTCAGAAAACAATCGCAGGCATAGCATTGCTGTGTCTCCAGTGAGAGATGATGAGAGCCTTGCAAGTTCACCTGCATTTCCAAGTCAAACCACATCCACAAAGGTTTCAAAGGCCAAGTCCAAAGTGCAAAGTCCATCATCTGGTGTACATAAAAATGGAACACAACAAACACCTGAAAAAGGAGCTGTTGTTTCTGCAAAGAAGAGGCTTTCTTTCCCAGCTTCTCCAGTTGGTTCAAGAAGGCATTCTGTTCCAACTAAGGTTGGAATAAGTTCCAATAACAAAAATGTTGCTACCATCCCTGAAGATAAAGTGAAAGAGAAAAATGGAGGGAGCAGGTAG 1494 0.4357 MGRKGGWFSSVKKVFISDSKKDQKAQKHHKSKLTCFGHYHGDPEPACEESAIAVVPALPPRKRVKPKKTEAENEENKQAFSLVLATAVAAGAAVAAAAEVSRLKTEPRYPGKSNEEIAAIKIQSAFRGYLARRSLRALRGLKRLRTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKIRMSEENQALQQQLQQKREKELEKLQASQVGEKWDDSSKSKEQIEAKLLNRQVAAMRRERAMAYALAHQQTWRNSSKSANATFMDPNNPHWGWNWLERWMATRPWEGQNTMYNNDHSSIKSAAGHNTMSVGELTKLYAQRDQNLDTKNSPASQKVKSPRSHNPPSKLASKASPSLTSSNSGKTKAPSPKGGSWGGDGDLRNIFSKNSENNRRHSIAVSPVRDDESLASSPAFPSQTTSTKVSKAKSKVQSPSSGVHKNGTQQTPEKGAVVSAKKRLSFPASPVGSRRHSVPTKVGISSNNKNVATIPEDKVKEKNGGSR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi45g00002 497 MobiDBLite consensus disorder prediction 406 445 - -
Gabi45g00002 497 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gabi45g00002 497 SMART iq_5 114 136 IPR000048 GO:0005515
Gabi45g00002 497 MobiDBLite consensus disorder prediction 469 483 - -
Gabi45g00002 497 PANTHER IQ-DOMAIN 5-RELATED 1 475 - -
Gabi45g00002 497 Gene3D - 62 143 - -
Gabi45g00002 497 MobiDBLite consensus disorder prediction 322 364 - -
Gabi45g00002 497 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Gabi45g00002 497 Coils Coil 178 201 - -
Gabi45g00002 497 MobiDBLite consensus disorder prediction 322 497 - -
Gabi45g00002 497 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi45g00002 Gabi-Chr45 13660 16350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi45g00002 1 478 IQD Protein Family AT5G03040 45.253 8.43e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi45g00002 - - gmx:100807725 560.836