Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4597g00004 ATGGGAATCGACCGAAGAAGTGGCTTTTGTAGCTCCAATTATGTTTTCTACAGCAAGCGTAAGCCACTTCCACTCCCACCAAACAAGTCCTTAGACGTCACCACTTTCATCTCCTCCCGGGCCCACCATGGCAAAATAGCCTTCATAGACGCCGCCACCGGCCGTCACTTCACCTTCCACCAACTATGGCTCGCCGTGGACGCCGTCGCCACGTGTCTCTCCGACATGGGCATCCGAAAGGGCCACGTCATACTCATCCTCTCTCCCAACTCAATCTACTTCCCTGTGGTGTGCCTCGCTGTCATGTCCCTCGGTGCCATCATCACCACAACAAACCCTCTCAACACAGCCCGCGAAATCGCCAAACAAATCGCCGATTCCAAACCCGTCCTCGCCTTCACAACCCTTCCCCTGCTTCAAAAAATCGCCGAGGCATCACCCACCTTACCAATCGTTCTCATGGACACAACAAACTCTGCCACTGGAGATAATAATAAAATCGTAACAACCACACTTAGCGAGATGATGAAAAAGGAACCCGGGGCGAGTCGAGTGAGGGAGCGAGTTGACCAGGACGACACGGCCACGCTTCTTTACTCTTCTGGAACAACGGGACCCAGCAAAGGGGTAATTTCGTCACATCGGAATTTAATTGCCATGGCTCAAATCGTTTTGGGTCGGTTCAACGTTGGAGACGAGGAAGAAACCTTCATCTGCACCGTTCCAATGTTTCATATATACGGTCTTGTAGCGTTCGCAACGGGGCTTCTGATTTCAGGATCAACGATTGTGGTGCTTTCGAAGTTCGAGATGCACGACATGTTATTAGCGATTGAGAAGTTCCGTGCCACGTATCTGCCGCTGGTGCCGCCGATACTGGTGGCGATGCTAAATAACGCGGATGCGATTAAGCGCAAGTATGATTTGAGATCGTTGCATTGGGTGCTGTCTGGTGGAGCTCCACTGAGTAAGGAGGTGATAGAAGGGTTCGTGGAAAAGTACCCTAATGTTGTGATCCTTCAGGGTTATGGCTTGACGGAATCAACCGGAGTTGGAGCATCCACCGATTCCTTGGAGGAGAGTCGTAGGTACGGCACGGCGGGGCTTTTGTCTCCGGCCACCGAGGCTAAAATTGTTGACCCTGACACCGGTGAACCACTTCCGGTTAACCGGACCGGTGAGCTCTGGCTTAGGGGTCCCACCATCATGAAAGGTTATTTTAGTAACGAGGAAGCCACCACTTCGACCCTTGATTCAGAGGGATGGTTAAGAACAGGGGATGTTTGTTACATTGATGATGACGGATTCATATTTGTTGTCGATCGGTTGAAAGAACTCATCAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAAGCCTTGTTGCTGACTCATCCTGCTATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGCTGGGCAGTTTCCAATGGCATATGTGGTAAGGAAAGCTGGAAGTAGCATATCGGAAAACCAAGTTATGGATTTTGTTGCAGGACAGGTGGCTCCTTACAAAAGAATTCGAAAAGTGGCGTTTATATCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTAGGAAGGATCTCATCAAGCTTGCAACGTCTAAACTCTAA 1644 0.4957 MGIDRRSGFCSSNYVFYSKRKPLPLPPNKSLDVTTFISSRAHHGKIAFIDAATGRHFTFHQLWLAVDAVATCLSDMGIRKGHVILILSPNSIYFPVVCLAVMSLGAIITTTNPLNTAREIAKQIADSKPVLAFTTLPLLQKIAEASPTLPIVLMDTTNSATGDNNKIVTTTLSEMMKKEPGASRVRERVDQDDTATLLYSSGTTGPSKGVISSHRNLIAMAQIVLGRFNVGDEEETFICTVPMFHIYGLVAFATGLLISGSTIVVLSKFEMHDMLLAIEKFRATYLPLVPPILVAMLNNADAIKRKYDLRSLHWVLSGGAPLSKEVIEGFVEKYPNVVILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATEAKIVDPDTGEPLPVNRTGELWLRGPTIMKGYFSNEEATTSTLDSEGWLRTGDVCYIDDDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQFPMAYVVRKAGSSISENQVMDFVAGQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4597g00004 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Gabi4597g00004 547 CDD 4CL 25 539 - -
Gabi4597g00004 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 541 - -
Gabi4597g00004 547 Gene3D - 445 546 IPR045851 -
Gabi4597g00004 547 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Gabi4597g00004 547 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Gabi4597g00004 547 SUPERFAMILY Acetyl-CoA synthetase-like 39 544 - -
Gabi4597g00004 547 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 444 - -
Gabi4597g00004 547 Gene3D - 14 444 IPR042099 -
Gabi4597g00004 547 Pfam AMP-binding enzyme 40 449 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4597g00004 Gabi-Chr4597 31624 35921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4597g00004 3 547 Monolignol Biosynthesis Gene Families AT1G20500 66.667 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4597g00004 K10526 - gmx:100811344 903.279