Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4587g00064 ATGGGTAAAATGAGGCGCATAATCGAGGAAGAGAAAGGAAAAGTGGGGATGATGATGAATGTTCAAGGGCAGGGTCGGCGTAAGGGTATGGGAATGGGAGTGAAGAAGTGGATGGTGGTATCGGAGAAAGGACAATCACTGCTTGAGGAAGTTGAGAAACACTCCATTATGAGGCGAACTGGGTTGCCGGCGCGTGACCTTAGGGTTCTCGATCCTATGTTGTCTAATCCCTCTTCCATCCTAGGACGTGACAGAGCCATTGTTGTCAACTTGGAACACATCAAAGCCATCATCACTCCCAAGGAGATCCTCATGATCAACTCCTCCAACCCTTTGTTTCTTCATTTCCTTCATGATCTTCTTGCGCGTCTTCCTTCTTCCAACAATGAAACGCCCCACCCGATGAGCAATGACACGGATACTGATTATGAAGCAAAATCTTTATCGGAGGGGTCACCTACATTGGCACAGGATGTACCAGAAGCACCAGCTCCCAAGCAGTTACCTTTTGAGTTCAGAGCACTTGAGGCATGTCTTGAATCTGCTTGCATGTGCCTTGAATCTGAGGCTCGAACATTGGAGGAAGAGGCTTACCCAGCTTTAGATGAATTGACCTCTAAAATTAGCACACTCAATCTTGAACGTGTAAGACAGATCAAGAGTCGTTTGGTTGCACTTTCTGGCCGTGTGCAGAAGGTGGCAGATCAACTCGAACATTTGTTGGACGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTCGATGCTCGCTTATTGGATCAGGCTGAGGCATCATCAAAACAAGCGTACAATGTTGAATTTGAAGATCATGACGACGAAAGGTGCAAACTAGGTAAATCAATTTCGGAAAAGTCAGACACAACTTCTGGTCCTGCTGACCTTGACGTTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGCACAGATAAATGGAATCATGCAAAAATTGTCCAGTATGAGTGAGTACGTGGATGACACAGAGGACTACATCAACATAATGTTGGATGATAAAAGAAATCAGCTTCTACAGGTAGCAGTAGTATTCGACACGCTAAACATGATAGTTAGTGCGGGAATTGTGGTTGTAGGATCGTTTGGCATGAATATTCACATAGATCTCTTTGATGGTCAAAATAGTCAATTTTGGGCTACAACTTGGGGTACAGTTGTAGGCTGTGTAGTTTTATTCCTTGTCTCTGTTTGGTGGGGTAAGAAAAGATATTTGCTCCCTCGTTAA 1266 0.4415 MGKMRRIIEEEKGKVGMMMNVQGQGRRKGMGMGVKKWMVVSEKGQSLLEEVEKHSIMRRTGLPARDLRVLDPMLSNPSSILGRDRAIVVNLEHIKAIITPKEILMINSSNPLFLHFLHDLLARLPSSNNETPHPMSNDTDTDYEAKSLSEGSPTLAQDVPEAPAPKQLPFEFRALEACLESACMCLESEARTLEEEAYPALDELTSKISTLNLERVRQIKSRLVALSGRVQKVADQLEHLLDDDNDMAEMYLTQKLDARLLDQAEASSKQAYNVEFEDHDDERCKLGKSISEKSDTTSGPADLDVEELEMLLEAYFAQINGIMQKLSSMSEYVDDTEDYINIMLDDKRNQLLQVAVVFDTLNMIVSAGIVVVGSFGMNIHIDLFDGQNSQFWATTWGTVVGCVVLFLVSVWWGKKRYLLPR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4587g00064 421 Gene3D - 28 109 - -
Gabi4587g00064 421 CDD Mrs2_Mfm1p-like 37 416 IPR039204 -
Gabi4587g00064 421 Gene3D Magnesium transport protein CorA, transmembrane region 115 351 - -
Gabi4587g00064 421 Coils Coil 176 196 - -
Gabi4587g00064 421 FunFam Magnesium transporter MRS2-1 24 108 - -
Gabi4587g00064 421 MobiDBLite consensus disorder prediction 128 156 - -
Gabi4587g00064 421 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 417 IPR039204 -
Gabi4587g00064 421 Pfam CorA-like Mg2+ transporter protein 306 414 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4587g00064 Gabi-Chr4587 726612 729907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4587g00064 37 419 MRS2 Gene Family AT3G19640 48.970 3.32e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4587g00064 - K16075 gmx:100808805 513.072