Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4587g00055 ATGTCTATGCTTCCAAGCAGTGGCATGCACCTTTCCCAGTGTGCTGAAAACAATAACTTTGAGGGTGAAAGCTTCCACAAGTTTTTTGAGTGCTGGCTGGCTGAACAAAACCAACATCTTGAAGACCTTATAGCAGCTGAATCAACTAACCAAACAGAAGAGCAAATTCAGTCACTGATTAATAGGGTGGTTGAGCATTATGAGTATTACTATAAGACCAAGTCAAGATGGACAAATGAAGATGTGTTGGCCATGTTTTCCCCAACATGGAGAAGCTCCTTGGAAGAGGCTTTTCTTTGGATTGGTGGGTGGAGACCAAGTATGGCATTTCACTTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCTAGGTTGAATGAACTGATTCAAGGGCTAAAAACATGTGATGACTTGGGAGAGATCTCAGCATTTCAACTTTCTCAGTTTGATGAGTTGCAAAGGAGGACTATTAGAGAGGAGAGGGAAATCACAGATATGATGGCAAAGCACCAGGAAACAGTTGCTGATGCTTCAATGGTTGAGTTATCTCATGTGGCTTCTGAGATGATTAGAGGCAATGAAACAGGAGATAATGAGAATAGAGAATTAGAGGACAAAGTTGAATCAACTCTGGTACCAAAGGAAGAAGGTCTTGAGAAGATCCTGATGAAAGGTGATGATCTAAGGCTGAGAACACTGCATGACATTGTTAATATTCTGACTCCAAAACAGGCCATACATTTCTTAATTGCTGCTGCAGAGTTGCACCTGAGGCTACATGAGTGGGGCAAGAAGAAAGATGCCAGAAAGGGAAATCAAGGTATTGGTGAGGGTAAAAGCCATAATCCATCAAGTTGA 858 0.4172 MSMLPSSGMHLSQCAENNNFEGESFHKFFECWLAEQNQHLEDLIAAESTNQTEEQIQSLINRVVEHYEYYYKTKSRWTNEDVLAMFSPTWRSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARLNELIQGLKTCDDLGEISAFQLSQFDELQRRTIREEREITDMMAKHQETVADASMVELSHVASEMIRGNETGDNENRELEDKVESTLVPKEEGLEKILMKGDDLRLRTLHDIVNILTPKQAIHFLIAAAELHLRLHEWGKKKDARKGNQGIGEGKSHNPSS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4587g00055 285 ProSiteProfiles DOG1 domain profile. 22 269 IPR025422 GO:0006351|GO:0043565
Gabi4587g00055 285 MobiDBLite consensus disorder prediction 264 285 - -
Gabi4587g00055 285 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 23 276 - -
Gabi4587g00055 285 Pfam Seed dormancy control 39 115 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4587g00055 Gabi-Chr4587 599284 600141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4587g00055 32 260 bZIP Transcription Factor Family AT5G06950 23.581 1.50e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4587g00055 - - gmx:100784399 407.142