Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4587g00053 ATGAAAAGCTTGAGTCTTGGGCCGTTCCTTGCTGCCAGTGTCCCTGTTGGTAGCAGAGTCTTTGCAGACCCTTTAACCAAAAAGTGTTTCCGCAAGCAACTTCACTTCCATTCCCGCTGTGTTGTTTTTTCTTCATACTCATGTTCTGCAACTCTATCAGTGGTGCCAGAATTAGAAGAGAAGCAAATATTTGATGGGGAGAAAGCTGCTTTACTTGTTAAAGATCTCAGAAAGAGTTTTGATTCAGGCAAGACAAAGACCTATGAATGGAGGGTTTCCCAGTTGGAGGGCATAGCTAAGATGCTAGAAGAAAAGGAGAAGGAAATTAGTGAAGCTCTTGATAAGGACCTTTCTAAACCTGGAGTCGAAGCATTTATAACTGAGATTTCCCAGGCAAAATCCTCATGTAGTGAAGCACTGCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAAAACTTCAATCACAACATATCCATCATCAGCAGAGATTGTGCCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGCTATCGATGGATCCAGTCATTGGAGCCATCTCAGCGGGTAACGCAGTGGTCCTGAAACCATCAGAAATTGCTCCAGCAACGTCATCACTGCTTGCAAATTTGATTGAAAATTACCTAGACAACTCTGCTGTAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTCTTGGAGCAAAAGTGGGACAAGATACTTTACACAGGCAGTGCTAGAGTAGGTCGCATTGTCATGACTGCTGCTGCAAAGCATCTTACACCAGTGATACTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAGATGTCAATTTACAAGTCACTGCTAGGAGGATAATATCTGGCAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCAGCTCTGATAAATGCTTTAAAAGAAGAATTGGAGCAATTTTTTGGGAAAGATCCGATGGAATCAAAAGACATGTCACGTATTGTGTCTCCAACCCAGTTTGCACGGCTTGTGAGGCTCTTGGATGAGGTCTCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCGTATTGGATGTTCCAGAAGATGCTATGGTAATGCAAGAGGAGATATTTGGGCCAATAATGCCAATTATCACTGTAGACAACATAGAAGATAGCTTCAGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCGTATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAATGACACTATCATACATGTTGGGACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTCTTACCATGGAAAATTCTCTTTTGATGGTTTCAGCCATAAGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCCTAAGGTATCCCCCATATACACCTGAGAAGGAAAAATTGTTGAAGGCACTTATCAGTGGCAATATTTTTCGCATATTTCTTACTTTGTTTGGATGGTCTAAAGAATGA 1626 0.4164 MKSLSLGPFLAASVPVGSRVFADPLTKKCFRKQLHFHSRCVVFSSYSCSATLSVVPELEEKQIFDGEKAALLVKDLRKSFDSGKTKTYEWRVSQLEGIAKMLEEKEKEISEALDKDLSKPGVEAFITEISQAKSSCSEALQELKHWMKPEKVKTSITTYPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIENYLDNSAVRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMTAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIISGKWACNSGQACISVDYIITRKEFAPALINALKEELEQFFGKDPMESKDMSRIVSPTQFARLVRLLDEVSDKIVLGGQRDEKKLKIAPTIVLDVPEDAMVMQEEIFGPIMPIITVDNIEDSFSIIKSKPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDTIIHVGTRGLPFGGVEESGMGSYHGKFSFDGFSHKKSVLYRSFDADSSLRYPPYTPEKEKLLKALISGNIFRIFLTLFGWSKE 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4587g00053 541 Coils Coil 95 115 - -
Gabi4587g00053 541 PANTHER ALDEHYDE DEHYDROGENASE 69 531 IPR012394 GO:0006081
Gabi4587g00053 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 278 476 IPR016163 GO:0016620
Gabi4587g00053 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 494 IPR016162 GO:0016491
Gabi4587g00053 541 FunFam Aldehyde dehydrogenase 77 281 - -
Gabi4587g00053 541 Pfam Aldehyde dehydrogenase family 69 496 IPR015590 GO:0016491
Gabi4587g00053 541 SUPERFAMILY ALDH-like 72 512 IPR016161 GO:0016491
Gabi4587g00053 541 PIRSF ALDH 53 536 IPR012394 GO:0006081
Gabi4587g00053 541 FunFam Aldehyde dehydrogenase 278 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4587g00053 Gabi-Chr4587 583176 588011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4587g00053 46 541 Aldehyde Dehydrogenase Gene Family AT4G34240 67.269 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4587g00053 K00128 - gmx:100800699 945.266