Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4587g00051 ATGCAAGGTGAATTGGAGTTACCACCTGGGTTCAGATTTCACCCCACTGACGATGAGCTCGTCACTCACTACTTGTGTAGGAAGTGTGCTTCCCAGTCAATTGCTGTTCCTATCATCAAAGAAATCGATTTGTATAAGTTTGATCCATGGCACCTTCCAGAAATGGCTCTTTATGGTGAGAAGGAATGGTACTTTTTCTCTCCTCGGGACCGAAAATATCCGAACGGTTCACGGCCGAACCGGGCTGCCGGAACCGGATATTGGAAGGCGACGGGGGCGGATAAACCGATCGGAAAACCGAAGGCGCTTGGGATAAAGAAGGCACTCGTGTTCTATGCAGGCAAAGCCCCCAAAGGTGTTAAGACCAATTGGATCATGCATGAATATCGCCTTGCCAACGTTGATAGATCAGCCTCCAAGAAAAACAGCAACTTGAGGCTTGATGATTGGGTGTTATGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAACACCGTGGGTGTGGCGGATCAGAAACCAGCAAAATTTTCAGAACAAGTTCAATTTCACTATGAGCATGAGCATGAGAATGAGACCAAGCCAGAGATAGATATAAAGATGTGCGGCCAGGATGATTTCAGGAATGACCAATTGCACATGGACACGTCGGATTCGGGTCCCAGGTTACACACGGACTCCAGCTGTTCCGAGGAGCACGTGGTTTCGCCGGATGTCACGTGCGACAAGGAGGTGCAGAGCGAGCCCAAGTGGAATGAACTTGACCTGGTGCCAGACCCAGACGCAGCCTTTGATTTTCAGTTCAATTTCATGGACAGTAACATAAACCCGTCAGTGGTGGATGACCCTTTTGCCCCTCAGGTCCAATTCCAAATAAACCAGCTCTCGACTTGGCAGGATATGTTCATGTACCTACCAAAGTCGTTTTGA 933 0.4823 MQGELELPPGFRFHPTDDELVTHYLCRKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNSNLRLDDWVLCRIYNKKGKIEKYNTVGVADQKPAKFSEQVQFHYEHEHENETKPEIDIKMCGQDDFRNDQLHMDTSDSGPRLHTDSSCSEEHVVSPDVTCDKEVQSEPKWNELDLVPDPDAAFDFQFNFMDSNINPSVVDDPFAPQVQFQINQLSTWQDMFMYLPKSF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4587g00051 310 FunFam NAC transcription factor 16 162 - -
Gabi4587g00051 310 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Gabi4587g00051 310 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Gabi4587g00051 310 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Gabi4587g00051 310 MobiDBLite consensus disorder prediction 211 230 - -
Gabi4587g00051 310 PANTHER NAC TRANSCRIPTION FACTOR 56 7 212 - -
Gabi4587g00051 310 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4587g00051 Gabi-Chr4587 575034 576896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4587g00051 1 310 NAC Transcription Factor Family AT1G01720 60.703 3.22e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4587g00051 NAM 3e-38 No_clan