Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4587g00018 ATGGAAGATATAAAAAACACAACATTAGAGGAGATAGTGTGTTATGAACCATCTATGATAACAACAGATGGGATATGGTCAGGACAAAACCCTTTGAACTATGCTCTTCCTCTCTTCCTCTTGCAAGTAGTTTTAGTTGTGACTGCCACCCGCATATGCGAATTCATACTCAAGCCCATTCGCCAGCCACGCGTCATTTCTGAAATCTTGGGAGGAGTAATATTGGGTCCTTCGGTGCTTGGGAGAAGCAAAACATTTGCTGATGCAGTGTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAACGTTGGTCTCATTTATTTTCTCTTCTTGTTGGGAGTGGGGATGGATGCATCTGCATTACGAAGGATTGGTAAAAAATCAGTGACCATAGCAGTTGCTGGTATGATCTTGCCTTTTAGCATTGGAGCAATCTTCTCCTTCTTTCTGATTGGAGATCATAAAGGAGGAACTACCAAAGGCTCTTACATCATACTCCTTGGTGTTGTTCTCTCTGTCACAGCACTTCCTGTCCTTGCTAGGATCCTAGTAGAGCTCAAACTCATCAACACAGAGATGGGAAGAGTTGCTCTTTCATCTGCACTCGTTACTGATGTGTGTTCTTGGGCGCTCTTGGCTGTATCCATAGCCTTGGCCGCAAATGAAAAACCTTCCTTGGCTTCCCTAATGGTTTTGTTGTCAAGCGCATTGTTTGTGGCCGTTTATGCTTTTGCAGTGCGACCTGCACTCATGTGGATCGTAAGGAATACCCCGGAAGGTCAATCATTCAGTGATTTCTATATATGTCTGATATTAGCAGGTGTCATGATCTCAGGTTTCATCACAGATTCTTTTGGAACCCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGACAATCCCAAATGGACCACTCGGTCTTGCTCTTGTTGAAAAGCTCGAGGACTTCATTTCGGGACTTTTGCTCCCTCTCTTTTTCGCCATCAGTGGACTAAAGACTAATTTAGGTCTCATCAACAGGTTATTCACTTGGGCAATTTTAATCATTCTTGTTGTTCTGGCTTGCATTGGCAAAATCGTTGGAACTGTAATCGTTGCTCTCTCCTATCAAATGTCACTTAGTGAAGGAGCAGCACTTGGCTTGCTCATGAACACAAAAGGCCTTGTTGAAATTGTCGTGCTTAATGTTGGTAGGGACCAGAAGGTTTTGGACGAGGAATCATTTGCAACCATGGTGATTATAACTGTTCTAATGACAGGAATAATTGTACCTGGCATATCAGCTTTATACAAACCATCAAGGGGGTTCATATCTTACAAAAGAAGAACCATTCAGATGTCAAAACGAGATGCAGAGTTCAGAGTCCTTGTGTGTGTCCATACCCCTCGGAATGTATCAACAATAATCAACCTCATTGAAGCCTCTAATCCAACAAAGAAGTCTCCAATATGCATCTATTTGCTCCATTTGGTCGAACTCACTGGCCGTGCATCTGCATTGCTCATTGTCCACAGCTCTAGGAAACCAGCTGATCCCCCTGCCTTGAATAGGAATCAAGCTCAATCTGAACACATAATCAGTGCCTTCGAAAACTATGAGCAACATGCTGATAATGTCTCAGTCCAGCCATTAACAGCAGTATCCCCTCATTCCACCATGCATGAAGATATTTGCAATTTGGCCGTGGATAAGCGTGTTGCTTTCATCATCATTCCTTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAACTGCAAACTTGGCTATTCGCACTGTCAACCAGAATGTACTAGCGAAAGCACCTTGCTCAGTTGGGATTCTAGTTGATAGAGGCTTAAATGGCTCCAACCGCATAGCTGCAGATCAATTGTCTAATCATGTGGCTGTGTTGTTTTTTGGAGGGCCAGATGATAGAGAAGCATTGAGCTATGGATGGAGGATGTCAGAACATCCAGGGGTAACCCTTACCATAATGCGTTTTGTTCCAGGAAAAGAAGTGACAAGGCCAGTGTTGCAGCCTAGTACTGTCAACCCAGATGAACCGAGGATACTTAATGTGGAAACAGATCAAGATACAGAGAAGCAACTTGATGAGAAGCTTGTAAATATGCTTATGATGGGTCATGAATATGATGACTCAATTGTTTACATTGAAAAGGTGGTTAACAATGGGGAGGAGACAATGGCAGCAATAAGGTCAACGAATGATGTTCATGACCTTTTCATAGTTGGGAGAGGCCAAGGAATGATATCACCACTCACAGCAGGACTCACTGATTGGAGTGAGTGCCCAGAGTTAGGAGCAATTGGTGATTTGTTAGCATCATCAGATTTTGTAGCAACTGGTTCGGTGTTGGTAGTGCAACAATATGTTGGGGCAGGGTCAGAGGAAGATGAGTTGGGAACACCAGACAATTCAGGGATGACAAATGAAGAATATGTCAATCAGATGAGCCATCATTCAACACCTTCAAGGGGACATACTGTGTTCAATACAGATCATTTGTGA 2517 0.4287 MEDIKNTTLEEIVCYEPSMITTDGIWSGQNPLNYALPLFLLQVVLVVTATRICEFILKPIRQPRVISEILGGVILGPSVLGRSKTFADAVFPLRSVMVIETMANVGLIYFLFLLGVGMDASALRRIGKKSVTIAVAGMILPFSIGAIFSFFLIGDHKGGTTKGSYIILLGVVLSVTALPVLARILVELKLINTEMGRVALSSALVTDVCSWALLAVSIALAANEKPSLASLMVLLSSALFVAVYAFAVRPALMWIVRNTPEGQSFSDFYICLILAGVMISGFITDSFGTHSVFGAFVFGLTIPNGPLGLALVEKLEDFISGLLLPLFFAISGLKTNLGLINRLFTWAILIILVVLACIGKIVGTVIVALSYQMSLSEGAALGLLMNTKGLVEIVVLNVGRDQKVLDEESFATMVIITVLMTGIIVPGISALYKPSRGFISYKRRTIQMSKRDAEFRVLVCVHTPRNVSTIINLIEASNPTKKSPICIYLLHLVELTGRASALLIVHSSRKPADPPALNRNQAQSEHIISAFENYEQHADNVSVQPLTAVSPHSTMHEDICNLAVDKRVAFIIIPFHKQQTVDGGMETANLAIRTVNQNVLAKAPCSVGILVDRGLNGSNRIAADQLSNHVAVLFFGGPDDREALSYGWRMSEHPGVTLTIMRFVPGKEVTRPVLQPSTVNPDEPRILNVETDQDTEKQLDEKLVNMLMMGHEYDDSIVYIEKVVNNGEETMAAIRSTNDVHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFVATGSVLVVQQYVGAGSEEDELGTPDNSGMTNEEYVNQMSHHSTPSRGHTVFNTDHL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4587g00018 838 Gene3D - 478 762 - -
Gabi4587g00018 838 Gene3D - 38 436 IPR038770 -
Gabi4587g00018 838 Pfam Sodium/hydrogen exchanger family 44 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi4587g00018 838 PANTHER CATION/H + ANTIPORTER 13 794 - -
Gabi4587g00018 838 FunFam Cation/H(+) antiporter 15 38 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4587g00018 Gabi-Chr4587 241353 244165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4587g00018 7 817 Antiporter Super Family AT2G13620 65.233 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4587g00018 K26731 - twl:119995570 1133.63